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细胞大小、基因组大小和最大生长速率是细菌和古菌生态变异中几乎相互独立的维度。

Cell size, genome size, and maximum growth rate are near-independent dimensions of ecological variation across bacteria and archaea.

作者信息

Westoby Mark, Nielsen Daniel Aagren, Gillings Michael R, Litchman Elena, Madin Joshua S, Paulsen Ian T, Tetu Sasha G

机构信息

Department of Biological Sciences Macquarie University Sydney NSW Australia.

Kellogg Biological Station Michigan State University Hickory Corners MI USA.

出版信息

Ecol Evol. 2021 Mar 16;11(9):3956-3976. doi: 10.1002/ece3.7290. eCollection 2021 May.

Abstract

Among bacteria and archaea, maximum relative growth rate, cell diameter, and genome size are widely regarded as important influences on ecological strategy. Via the most extensive data compilation so far for these traits across all clades and habitats, we ask whether they are correlated and if so how. Overall, we found little correlation among them, indicating they should be considered as independent dimensions of ecological variation. Nor was correlation evident within particular habitat types. A weak nonlinearity (6% of variance) was found whereby high maximum growth rates (temperature-adjusted) tended to occur in the midrange of cell diameters. Species identified in the literature as oligotrophs or copiotrophs were clearly separated on the dimension of maximum growth rate, but not on the dimensions of genome size or cell diameter.

摘要

在细菌和古菌中,最大相对生长速率、细胞直径和基因组大小被广泛认为是对生态策略的重要影响因素。通过迄今为止对所有进化枝和栖息地的这些特征进行的最广泛的数据汇编,我们探究它们是否相关,如果相关又是如何相关的。总体而言,我们发现它们之间几乎没有相关性,这表明它们应被视为生态变异的独立维度。在特定的栖息地类型中相关性也不明显。我们发现了一种微弱的非线性关系(6%的方差),即较高的最大生长速率(经温度调整)往往出现在细胞直径的中等范围内。文献中被认定为贫养菌或富养菌的物种在最大生长速率维度上明显分开,但在基因组大小或细胞直径维度上并非如此。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8f86/8093753/0e54a11ecd80/ECE3-11-3956-g013.jpg

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