在美国爱荷华州发现的一种新型猪繁殖与呼吸综合征病毒2限制性片段长度多态性1-4-4谱系1C变体的完整编码基因组序列。
Complete Coding Genome Sequence of a Novel Porcine Reproductive and Respiratory Syndrome Virus 2 Restriction Fragment Length Polymorphism 1-4-4 Lineage 1C Variant Identified in Iowa, USA.
作者信息
Trevisan Giovani, Li Ganwu, Moura Cesar A A, Coleman Katie, Thomas Pete, Zhang Jianqiang, Gauger Philip, Zeller Michael, Linhares Daniel
机构信息
Veterinary Diagnostic and Production Animal Medicine, Iowa State University, Ames, Iowa, USA.
Iowa Select Farms, Iowa Falls, Iowa, USA.
出版信息
Microbiol Resour Announc. 2021 May 27;10(21):e0044821. doi: 10.1128/MRA.00448-21.
Abstract
A porcine reproductive and respiratory syndrome virus 2 strain was identified in lung samples from nursery piglets associated with a 17.15% mortality rate on a swine farm in Iowa. Open reading frame 5 (ORF5) sequencing indicated that this strain is a restriction fragment length polymorphism (RFLP) 1-4-4 lineage 1C variant strain, and its complete coding genome sequence was determined.
摘要
在爱荷华州一个养猪场与17.15%死亡率相关的保育仔猪肺样本中鉴定出一株猪繁殖与呼吸综合征病毒2型毒株。开放阅读框5（ORF5）测序表明，该毒株是一种限制性片段长度多态性（RFLP）1-4-4谱系1C变异株，并测定了其完整编码基因组序列。
相似文献
1
Complete Coding Genome Sequence of a Novel Porcine Reproductive and Respiratory Syndrome Virus 2 Restriction Fragment Length Polymorphism 1-4-4 Lineage 1C Variant Identified in Iowa, USA.在美国爱荷华州发现的一种新型猪繁殖与呼吸综合征病毒2限制性片段长度多态性1-4-4谱系1C变体的完整编码基因组序列。
Microbiol Resour Announc. 2021 May 27;10(21):e0044821. doi: 10.1128/MRA.00448-21.
2
Characterization of porcine reproductive and respiratory syndrome virus (ORF5 RFLP 1-7-4 viruses) in northern China.中国北方猪繁殖与呼吸综合征病毒（ORF5 RFLP 1-7-4 病毒）的特征。
Microb Pathog. 2020 Mar;140:103941. doi: 10.1016/j.micpath.2019.103941. Epub 2019 Dec 17.
3
4
Restriction fragment length polymorphism analysis of open reading frame 5 gene of porcine reproductive and respiratory syndrome virus isolates in Korea.韩国猪繁殖与呼吸综合征病毒分离株开放阅读框5基因的限制性片段长度多态性分析
Arch Virol. 2000;145(7):1481-8. doi: 10.1007/s007050070105.
5
Molecular epidemiology of porcine reproductive and respiratory syndrome virus (PRRSV) in Québec.魁北克猪繁殖与呼吸综合征病毒（PRRSV）的分子流行病学
Virus Res. 2003 Oct;96(1-2):3-14. doi: 10.1016/s0168-1702(03)00168-0.
6
Differentiation of a porcine reproductive and respiratory syndrome virus vaccine strain from North American field strains by restriction fragment length polymorphism analysis of ORF 5.通过对开放阅读框5进行限制性片段长度多态性分析，区分猪繁殖与呼吸综合征病毒疫苗株与北美田间毒株
J Vet Diagn Invest. 1998 Apr;10(2):140-4. doi: 10.1177/104063879801000204.
7
Restriction fragment length polymorphism of porcine reproductive and respiratory syndrome viruses recovered from Ontario farms, 1998-2000.1998 - 2000年从安大略省农场分离出的猪繁殖与呼吸综合征病毒的限制性片段长度多态性
J Vet Diagn Invest. 2002 Jul;14(4):343-7. doi: 10.1177/104063870201400415.
8
Emergence of novel porcine reproductive and respiratory syndrome viruses (ORF5 RFLP 1-7-4 viruses) in China.新型猪繁殖与呼吸综合征病毒（ORF5 RFLP 1-7-4 病毒）在中国的出现。
Vet Microbiol. 2018 Aug;222:105-108. doi: 10.1016/j.vetmic.2018.06.017. Epub 2018 Jun 30.
9
Analysis of open reading frame 5 in Japanese porcine reproductive and respiratory syndrome virus isolates by restriction fragment length polymorphism.通过限制性片段长度多态性分析日本猪繁殖与呼吸综合征病毒分离株的开放阅读框5
J Vet Med Sci. 2001 Nov;63(11):1203-7. doi: 10.1292/jvms.63.1203.
10
Porcine reproductive and respiratory disease virus: Evolution and recombination yields distinct ORF5 RFLP 1-7-4 viruses with individual pathogenicity.猪繁殖与呼吸综合征病毒：进化与重组产生具有独特致病性的不同开放阅读框5限制性片段长度多态性1-7-4病毒。
Virology. 2018 Jan 1;513:168-179. doi: 10.1016/j.virol.2017.10.002. Epub 2017 Nov 5.
引用本文的文献
1
Efficacy of an intranasally administered live attenuated PRRSV-2 vaccine against challenge with a highly virulent PRRSV-1 strain.经鼻内接种的减毒活猪繁殖与呼吸综合征病毒2型疫苗对高致病性猪繁殖与呼吸综合征病毒1型毒株攻毒的效力
Front Vet Sci. 2025 Aug 22;12:1619052. doi: 10.3389/fvets.2025.1619052. eCollection 2025.
2
Causal inference study of PRRSV-MLV vaccine dosing effects on wean-to-finish performance during outbreaks.猪繁殖与呼吸综合征减毒活疫苗（PRRSV-MLV）剂量对疫病爆发期间仔猪到育肥猪生长性能影响的因果推断研究
Front Vet Sci. 2025 Jul 24;12:1575029. doi: 10.3389/fvets.2025.1575029. eCollection 2025.
3
Emergence of a PRRSV Strain Recombined From Two Modified-Live Virus Vaccines and Its Elimination From a Breeding Herd.一种由两种减毒活疫苗重组而成的猪繁殖与呼吸综合征病毒（PRRSV）毒株的出现及其从一个种猪群中的清除
Transbound Emerg Dis. 2025 Jul 20;2025:5770608. doi: 10.1155/tbed/5770608. eCollection 2025.
4
The mRNA and protein of IL-8 oppositely regulate PRRSV replication via nucleoprotein and 14-3-3γ.白细胞介素-8的信使核糖核酸和蛋白质通过核蛋白和14-3-3γ蛋白对猪繁殖与呼吸综合征病毒的复制产生相反的调节作用。
J Virol. 2025 Aug 19;99(8):e0065525. doi: 10.1128/jvi.00655-25. Epub 2025 Jul 24.
5
Genomic characteristics and epidemic trends of NADC30-like PRRSV in China.中国NADC30样猪繁殖与呼吸综合征病毒的基因组特征及流行趋势
Porcine Health Manag. 2025 May 28;11(1):30. doi: 10.1186/s40813-025-00444-7.
6
First Identification and Genomic Characterization of NADC34-Like PRRSV Strains Isolated from MLV-Vaccinated Pigs in Korea.首次从韩国接种MLV疫苗的猪中分离出的类NADC34型猪繁殖与呼吸综合征病毒毒株的鉴定及基因组特征分析
Transbound Emerg Dis. 2023 Apr 17;2023:9995433. doi: 10.1155/2023/9995433. eCollection 2023.
7
Isolation, Pathogenicity, and Comparative Phylogenetic Characteristics of an Intralineage Recombinant NADC34-Like PRRSV in China.中国一株谱系内重组NADC34样猪繁殖与呼吸综合征病毒的分离、致病性及比较系统发育特征
Transbound Emerg Dis. 2023 Sep 12;2023:9929573. doi: 10.1155/2023/9929573. eCollection 2023.
8
Comparative Genomic and Biological Investigation of NADC30- and NADC34-Like PRRSV Strains Isolated in South Korea.韩国分离的NADC30和NADC34样猪繁殖与呼吸综合征病毒毒株的比较基因组和生物学研究
Transbound Emerg Dis. 2025 Jan 22;2025:9015349. doi: 10.1155/tbed/9015349. eCollection 2025.
9
Refining Lineage Classification and Updated RFLP Patterns of PRRSV-2 Revealed Viral Spatiotemporal Distribution Characteristics in China in 1991-2023.改进猪繁殖与呼吸综合征病毒2型（PRRSV-2）的谱系分类及更新的限制性片段长度多态性（RFLP）模式揭示了1991 - 2023年中国病毒的时空分布特征
Transbound Emerg Dis. 2025 Mar 9;2025:9977088. doi: 10.1155/tbed/9977088. eCollection 2025.
10
Harnessing sequencing data for porcine reproductive and respiratory syndrome virus (PRRSV): tracking genetic evolution dynamics and emerging sequences in US swine industry.利用猪繁殖与呼吸综合征病毒（PRRSV）的测序数据：追踪美国养猪业的遗传进化动态和新出现的序列。
Front Vet Sci. 2025 Mar 6;12:1571020. doi: 10.3389/fvets.2025.1571020. eCollection 2025.
本文引用的文献
1
Prediction of seasonal patterns of porcine reproductive and respiratory syndrome virus RNA detection in the U.S. swine industry.美国养猪业中猪繁殖与呼吸综合征病毒RNA检测季节性模式的预测。
J Vet Diagn Invest. 2020 May;32(3):394-400. doi: 10.1177/1040638720912406. Epub 2020 Apr 10.
2
Genetic diversity of porcine reproductive and respiratory syndrome virus 1 in the United States of America from 2010 to 2018.2010 年至 2018 年美国猪繁殖与呼吸综合征病毒 1 的遗传多样性。
Vet Microbiol. 2019 Dec;239:108486. doi: 10.1016/j.vetmic.2019.108486. Epub 2019 Nov 6.
3
Recombination between Vaccine and Field Strains of Porcine Reproductive and Respiratory Syndrome Virus.猪繁殖与呼吸综合征病毒疫苗株与野毒株的基因重组。
Emerg Infect Dis. 2019 Dec;25(12):2335-2337. doi: 10.3201/eid2512.191111.
4
Macroepidemiological aspects of porcine reproductive and respiratory syndrome virus detection by major United States veterinary diagnostic laboratories over time, age group, and specimen.美国主要兽医诊断实验室随时间推移、年龄组和样本对猪繁殖与呼吸综合征病毒的宏观流行病学检测
PLoS One. 2019 Oct 16;14(10):e0223544. doi: 10.1371/journal.pone.0223544. eCollection 2019.
5
High-throughput whole genome sequencing of Porcine reproductive and respiratory syndrome virus from cell culture materials and clinical specimens using next-generation sequencing technology.使用下一代测序技术对来自细胞培养材料和临床样本的猪繁殖与呼吸综合征病毒进行高通量全基因组测序。
J Vet Diagn Invest. 2017 Jan;29(1):41-50. doi: 10.1177/1040638716673404. Epub 2016 Dec 20.
6
Reorganization and expansion of the nidoviral family Arteriviridae.动脉炎病毒科套式病毒目病毒的重组与扩展
Arch Virol. 2016 Mar;161(3):755-68. doi: 10.1007/s00705-015-2672-z. Epub 2015 Nov 25.
7
Kraken: ultrafast metagenomic sequence classification using exact alignments.克拉肯：使用精确比对的超快速宏基因组序列分类
Genome Biol. 2014 Mar 3;15(3):R46. doi: 10.1186/gb-2014-15-3-r46.
8
The molecular biology of arteriviruses.动脉炎病毒的分子生物学
J Gen Virol. 1998 May;79 ( Pt 5):961-79. doi: 10.1099/0022-1317-79-5-961.
9
Experimental reproduction of porcine epidemic abortion and respiratory syndrome (mystery swine disease) by infection with Lelystad virus: Koch's postulates fulfilled.通过感染莱利斯塔德病毒进行猪流行性流产和呼吸综合征（神秘猪病）的实验性再现：科赫法则得到满足。
Vet Q. 1991 Jul;13(3):131-6. doi: 10.1080/01652176.1991.9694297.
10
Mystery swine disease in The Netherlands: the isolation of Lelystad virus.荷兰的神秘猪病：莱利斯塔德病毒的分离
Vet Q. 1991 Jul;13(3):121-30. doi: 10.1080/01652176.1991.9694296.
Zotero 插件