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基于胸部 X 光图像和新型深度卷积神经网络的冠状病毒病分析。

Coronavirus disease analysis using chest X-ray images and a novel deep convolutional neural network.

机构信息

Pattern Recognition Lab, Department of Computer & Information Sciences, Pakistan Institute of Engineering & Applied Sciences, Nilore, Islamabad 45650, Pakistan; PIEAS Artificial Intelligence Center (PAIC), Pakistan Institute of Engineering & Applied Sciences, Nilore, Islamabad 45650, Pakistan.

Pattern Recognition Lab, Department of Computer & Information Sciences, Pakistan Institute of Engineering & Applied Sciences, Nilore, Islamabad 45650, Pakistan.

出版信息

Photodiagnosis Photodyn Ther. 2021 Sep;35:102473. doi: 10.1016/j.pdpdt.2021.102473. Epub 2021 Aug 1.

Abstract

BACKGROUND

The recent emergence of a highly infectious and contagious respiratory viral disease known as COVID-19 has vastly impacted human lives and overloaded the health care system. Therefore, it is crucial to develop a fast and accurate diagnostic system for the timely identification of COVID-19 infected patients and thus to help control its spread.

METHODS

This work proposes a new deep CNN based technique for COVID-19 classification in X-ray images. In this regard, two novel custom CNN architectures, namely COVID-RENet-1 and COVID-RENet-2, are developed for COVID-19 specific pneumonia analysis. The proposed technique systematically employs Region and Edge-based operations along with convolution operations. The advantage of the proposed idea is validated by performing series of experimentation and comparing results with two baseline CNNs that exploited either a single type of pooling operation or strided convolution down the architecture. Additionally, the discrimination capacity of the proposed technique is assessed by benchmarking it against the state-of-the-art CNNs on radiologist's authenticated chest X-ray dataset. Implementation is available at https://github.com/PRLAB21/Coronavirus-Disease-Analysis-using-Chest-X-Ray-Images.

RESULTS

The proposed classification technique shows good generalization as compared to existing CNNs by achieving promising MCC (0.96), F-score (0.98) and Accuracy (98%). This suggests that the idea of synergistically using Region and Edge-based operations aid in better exploiting the region homogeneity, textural variations, and region boundary-related information in an image, which helps to capture the pneumonia specific pattern.

CONCLUSIONS

The encouraging results of the proposed classification technique on the test set with high sensitivity (0.98) and precision (0.98) suggest the effectiveness of the proposed technique. Thus, it suggests the potential use of the proposed technique in other X-ray imagery-based infectious disease analysis.

摘要

背景

一种名为 COVID-19 的高传染性和高传染性呼吸道病毒疾病的出现,极大地影响了人类的生活,并使医疗系统不堪重负。因此,开发一种快速准确的诊断系统,及时识别 COVID-19 感染患者,从而帮助控制其传播至关重要。

方法

本研究提出了一种基于深度卷积神经网络的 COVID-19 分类新方法,用于 X 射线图像。为此,开发了两种新的定制 CNN 架构,即 COVID-RENet-1 和 COVID-RENet-2,用于 COVID-19 特定性肺炎分析。所提出的方法系统地采用基于区域和边缘的操作以及卷积操作。通过进行一系列实验并将结果与仅使用一种池化操作或在架构中使用跨步卷积的两种基线 CNN 进行比较,验证了所提出的思想的优势。此外,通过在放射科医生认证的胸部 X 射线数据集上与最先进的 CNN 进行基准测试,评估了所提出技术的鉴别能力。可在 https://github.com/PRLAB21/Coronavirus-Disease-Analysis-using-Chest-X-Ray-Images 上获得实现。

结果

与现有的 CNN 相比,所提出的分类技术通过实现有希望的 MCC(0.96)、F 分数(0.98)和准确性(98%)显示出良好的泛化能力。这表明,协同使用基于区域和边缘的操作的想法有助于更好地利用图像中的区域同质性、纹理变化和区域边界相关信息,从而帮助捕获肺炎特定模式。

结论

所提出的分类技术在具有高灵敏度(0.98)和精度(0.98)的测试集上的令人鼓舞的结果表明了该技术的有效性。因此,它表明该技术在其他基于 X 射线图像的传染病分析中具有潜在的用途。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ff/8325950/15eb189e73da/gr1_lrg.jpg

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