• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用非 COVID 病变的共享知识进行高效 COVID-19 CT 肺部感染分割。

Exploiting Shared Knowledge From Non-COVID Lesions for Annotation-Efficient COVID-19 CT Lung Infection Segmentation.

出版信息

IEEE J Biomed Health Inform. 2021 Nov;25(11):4152-4162. doi: 10.1109/JBHI.2021.3106341. Epub 2021 Nov 5.

DOI:10.1109/JBHI.2021.3106341
PMID:34415840
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8843066/
Abstract

The novel Coronavirus disease (COVID-19) is a highly contagious virus and has spread all over the world, posing an extremely serious threat to all countries. Automatic lung infection segmentation from computed tomography (CT) plays an important role in the quantitative analysis of COVID-19. However, the major challenge lies in the inadequacy of annotated COVID-19 datasets. Currently, there are several public non-COVID lung lesion segmentation datasets, providing the potential for generalizing useful information to the related COVID-19 segmentation task. In this paper, we propose a novel relation-driven collaborative learning model to exploit shared knowledge from non-COVID lesions for annotation-efficient COVID-19 CT lung infection segmentation. The model consists of a general encoder to capture general lung lesion features based on multiple non-COVID lesions, and a target encoder to focus on task-specific features based on COVID-19 infections. We develop a collaborative learning scheme to regularize feature-level relation consistency of given input and encourage the model to learn more general and discriminative representation of COVID-19 infections. Extensive experiments demonstrate that trained with limited COVID-19 data, exploiting shared knowledge from non-COVID lesions can further improve state-of-the-art performance with up to 3.0% in dice similarity coefficient and 4.2% in normalized surface dice. In addition, experimental results on large scale 2D dataset with CT slices show that our method significantly outperforms cutting-edge segmentation methods metrics. Our method promotes new insights into annotation-efficient deep learning and illustrates strong potential for real-world applications in the global fight against COVID-19 in the absence of sufficient high-quality annotations.

摘要

新型冠状病毒病(COVID-19)是一种高传染性病毒,已在全球范围内传播,对所有国家构成极其严重的威胁。从计算机断层扫描(CT)自动进行肺部感染分割在 COVID-19 的定量分析中起着重要作用。然而,主要的挑战在于 COVID-19 标注数据集的不足。目前,有几个公开的非 COVID 肺部病变分割数据集,为将有用信息推广到相关 COVID-19 分割任务提供了潜力。在本文中,我们提出了一种新颖的关系驱动协作学习模型,以利用非 COVID 病变中的共享知识进行高效标注 COVID-19 CT 肺部感染分割。该模型由一个通用编码器组成,该编码器基于多个非 COVID 病变来捕获一般的肺部病变特征,以及一个目标编码器,该编码器基于 COVID-19 感染来关注特定于任务的特征。我们开发了一种协作学习方案来正则化给定输入的特征级关系一致性,并鼓励模型学习更通用和有区别的 COVID-19 感染表示。广泛的实验表明,用有限的 COVID-19 数据进行训练,利用非 COVID 病变中的共享知识可以进一步提高最先进的性能,在骰子相似系数上提高高达 3.0%,在归一化表面骰子上提高 4.2%。此外,在具有 CT 切片的大规模 2D 数据集上的实验结果表明,我们的方法在缺乏足够高质量标注的情况下,在全球抗击 COVID-19 的实际应用中具有明显的优势,明显优于最先进的分割方法。我们的方法为高效标注的深度学习提供了新的见解,并展示了在全球抗击 COVID-19 中实际应用的巨大潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/55e19741c652/zhang7-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/1527e1b972dd/zhang1-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/42bb950458fd/zhang2-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/2f05e4864b0e/zhang3-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/4101efbf81a6/zhang4-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/e6b0dcdfcfa5/zhang5-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/110aadbfdf77/zhang6-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/55e19741c652/zhang7-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/1527e1b972dd/zhang1-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/42bb950458fd/zhang2-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/2f05e4864b0e/zhang3-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/4101efbf81a6/zhang4-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/e6b0dcdfcfa5/zhang5-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/110aadbfdf77/zhang6-3106341.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/29eb/8843066/55e19741c652/zhang7-3106341.jpg

相似文献

1
Exploiting Shared Knowledge From Non-COVID Lesions for Annotation-Efficient COVID-19 CT Lung Infection Segmentation.利用非 COVID 病变的共享知识进行高效 COVID-19 CT 肺部感染分割。
IEEE J Biomed Health Inform. 2021 Nov;25(11):4152-4162. doi: 10.1109/JBHI.2021.3106341. Epub 2021 Nov 5.
2
Does non-COVID-19 lung lesion help? investigating transferability in COVID-19 CT image segmentation.非 COVID-19 肺部病变有帮助吗?在 COVID-19 CT 图像分割中探究可转移性。
Comput Methods Programs Biomed. 2021 Apr;202:106004. doi: 10.1016/j.cmpb.2021.106004. Epub 2021 Feb 23.
3
Toward data-efficient learning: A benchmark for COVID-19 CT lung and infection segmentation.迈向数据高效学习:COVID-19 CT 肺和感染分割的基准。
Med Phys. 2021 Mar;48(3):1197-1210. doi: 10.1002/mp.14676. Epub 2021 Feb 6.
4
HFCF-Net: A hybrid-feature cross fusion network for COVID-19 lesion segmentation from CT volumetric images.HFCF-Net:一种用于从 CT 容积图像中分割 COVID-19 病变的混合特征交叉融合网络。
Med Phys. 2022 Jun;49(6):3797-3815. doi: 10.1002/mp.15600. Epub 2022 Mar 30.
5
COVID-19 lung infection segmentation with a novel two-stage cross-domain transfer learning framework.COVID-19 肺部感染分割的新型两阶段跨域迁移学习框架。
Med Image Anal. 2021 Dec;74:102205. doi: 10.1016/j.media.2021.102205. Epub 2021 Aug 6.
6
A Noise-Robust Framework for Automatic Segmentation of COVID-19 Pneumonia Lesions From CT Images.一种用于从 CT 图像中自动分割 COVID-19 肺炎病变的抗噪框架。
IEEE Trans Med Imaging. 2020 Aug;39(8):2653-2663. doi: 10.1109/TMI.2020.3000314.
7
Lung Lesion Localization of COVID-19 From Chest CT Image: A Novel Weakly Supervised Learning Method.COVID-19 肺部病变的 CT 图像定位:一种新的弱监督学习方法。
IEEE J Biomed Health Inform. 2021 Jun;25(6):1864-1872. doi: 10.1109/JBHI.2021.3067465. Epub 2021 Jun 3.
8
DUDA-Net: a double U-shaped dilated attention network for automatic infection area segmentation in COVID-19 lung CT images.DUDA-Net:一种双 U 形扩张注意力网络,用于 COVID-19 肺部 CT 图像中的自动感染区域分割。
Int J Comput Assist Radiol Surg. 2021 Sep;16(9):1425-1434. doi: 10.1007/s11548-021-02418-w. Epub 2021 Jun 5.
9
Inf-Net: Automatic COVID-19 Lung Infection Segmentation From CT Images.Inf-Net:从 CT 图像自动进行 COVID-19 肺部感染分割。
IEEE Trans Med Imaging. 2020 Aug;39(8):2626-2637. doi: 10.1109/TMI.2020.2996645.
10
GIFNet: an effective global infection feature network for automatic COVID-19 lung lesions segmentation.GIFNet:一种用于自动分割COVID-19肺部病变的有效全局感染特征网络。
Med Biol Eng Comput. 2024 Feb 3. doi: 10.1007/s11517-024-03024-z.

引用本文的文献

1
DECE-Net: a dual-path encoder network with contour enhancement for pneumonia lesion segmentation.DECE-Net:一种用于肺炎病灶分割的具有轮廓增强功能的双路径编码器网络。
J Med Imaging (Bellingham). 2025 May;12(3):034503. doi: 10.1117/1.JMI.12.3.034503. Epub 2025 May 23.
2
DECTNet: Dual Encoder Network combined convolution and Transformer architecture for medical image segmentation.DECTNet:用于医学图像分割的双编码器网络结合卷积和 Transformer 架构。
PLoS One. 2024 Apr 4;19(4):e0301019. doi: 10.1371/journal.pone.0301019. eCollection 2024.
3
GIFNet: an effective global infection feature network for automatic COVID-19 lung lesions segmentation.

本文引用的文献

1
The Liver Tumor Segmentation Benchmark (LiTS).肝脏肿瘤分割基准(LiTS)。
Med Image Anal. 2023 Feb;84:102680. doi: 10.1016/j.media.2022.102680. Epub 2022 Nov 17.
2
Rapid artificial intelligence solutions in a pandemic-The COVID-19-20 Lung CT Lesion Segmentation Challenge.大流行中的快速人工智能解决方案——COVID-19-20 肺 CT 病变分割挑战赛。
Med Image Anal. 2022 Nov;82:102605. doi: 10.1016/j.media.2022.102605. Epub 2022 Sep 6.
3
AbdomenCT-1K: Is Abdominal Organ Segmentation a Solved Problem?腹部 CT-1K:腹部器官分割是否已经解决?
GIFNet:一种用于自动分割COVID-19肺部病变的有效全局感染特征网络。
Med Biol Eng Comput. 2024 Feb 3. doi: 10.1007/s11517-024-03024-z.
4
SuperMini-seg: An ultra lightweight network for COVID-19 lung infection segmentation from CT images.超迷你分割:一种用于从CT图像中分割新型冠状病毒肺炎肺部感染的超轻量级网络。
Biomed Signal Process Control. 2023 Aug;85:104896. doi: 10.1016/j.bspc.2023.104896. Epub 2023 Mar 21.
5
Omnidirectional 2.5D representation for COVID-19 diagnosis using chest CTs.使用胸部CT进行COVID-19诊断的全向2.5D表示
J Vis Commun Image Represent. 2023 Mar;91:103775. doi: 10.1016/j.jvcir.2023.103775. Epub 2023 Jan 31.
6
COVID-19 CT ground-glass opacity segmentation based on attention mechanism threshold.基于注意力机制阈值的COVID-19 CT磨玻璃影分割
Biomed Signal Process Control. 2023 Mar;81:104486. doi: 10.1016/j.bspc.2022.104486. Epub 2022 Dec 5.
7
Chest X ray and cough sample based deep learning framework for accurate diagnosis of COVID-19.基于胸部X光和咳嗽样本的深度学习框架用于准确诊断新冠肺炎。
Comput Electr Eng. 2022 Oct;103:108391. doi: 10.1016/j.compeleceng.2022.108391. Epub 2022 Sep 14.
8
HADCNet: Automatic segmentation of COVID-19 infection based on a hybrid attention dense connected network with dilated convolution.HADCNet:基于带空洞卷积的混合注意力密集连接网络的 COVID-19 感染自动分割。
Comput Biol Med. 2022 Oct;149:105981. doi: 10.1016/j.compbiomed.2022.105981. Epub 2022 Aug 20.
9
The Acoustic Dissection of Cough: Diving Into Machine Listening-based COVID-19 Analysis and Detection.咳嗽的声学剖析:深入研究基于机器聆听的 COVID-19 分析和检测。
J Voice. 2024 Nov;38(6):1264-1277. doi: 10.1016/j.jvoice.2022.06.011. Epub 2022 Jun 15.
IEEE Trans Pattern Anal Mach Intell. 2022 Oct;44(10):6695-6714. doi: 10.1109/TPAMI.2021.3100536. Epub 2022 Sep 14.
4
Serial Quantitative Chest CT Assessment of COVID-19: A Deep Learning Approach.COVID-19的胸部CT序列定量评估:一种深度学习方法。
Radiol Cardiothorac Imaging. 2020 Mar 30;2(2):e200075. doi: 10.1148/ryct.2020200075. eCollection 2020 Apr.
5
Label-Free Segmentation of COVID-19 Lesions in Lung CT.肺 CT 中 COVID-19 病变的无标记分割。
IEEE Trans Med Imaging. 2021 Oct;40(10):2808-2819. doi: 10.1109/TMI.2021.3066161. Epub 2021 Sep 30.
6
Does non-COVID-19 lung lesion help? investigating transferability in COVID-19 CT image segmentation.非 COVID-19 肺部病变有帮助吗?在 COVID-19 CT 图像分割中探究可转移性。
Comput Methods Programs Biomed. 2021 Apr;202:106004. doi: 10.1016/j.cmpb.2021.106004. Epub 2021 Feb 23.
7
Automatic COVID-19 CT segmentation using U-Net integrated spatial and channel attention mechanism.使用集成空间和通道注意力机制的U-Net进行新冠肺炎CT图像自动分割
Int J Imaging Syst Technol. 2021 Mar;31(1):16-27. doi: 10.1002/ima.22527. Epub 2020 Nov 24.
8
Toward data-efficient learning: A benchmark for COVID-19 CT lung and infection segmentation.迈向数据高效学习:COVID-19 CT 肺和感染分割的基准。
Med Phys. 2021 Mar;48(3):1197-1210. doi: 10.1002/mp.14676. Epub 2021 Feb 6.
9
nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation.nnU-Net:一种基于深度学习的生物医学图像分割的自配置方法。
Nat Methods. 2021 Feb;18(2):203-211. doi: 10.1038/s41592-020-01008-z. Epub 2020 Dec 7.
10
Multi-task deep learning based CT imaging analysis for COVID-19 pneumonia: Classification and segmentation.基于多任务深度学习的 COVID-19 肺炎 CT 成像分析:分类与分割。
Comput Biol Med. 2020 Nov;126:104037. doi: 10.1016/j.compbiomed.2020.104037. Epub 2020 Oct 8.