• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

致病细菌中的 RNA 修饰:对宿主适应和毒力的影响。

RNA Modifications in Pathogenic Bacteria: Impact on Host Adaptation and Virulence.

机构信息

Université de Strasbourg, CNRS, Architecture et Réactivité de l'ARN, UPR 9002, F-67000 Strasbourg, France.

出版信息

Genes (Basel). 2021 Jul 24;12(8):1125. doi: 10.3390/genes12081125.

DOI:10.3390/genes12081125
PMID:34440299
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8394870/
Abstract

RNA modifications are involved in numerous biological processes and are present in all RNA classes. These modifications can be constitutive or modulated in response to adaptive processes. RNA modifications play multiple functions since they can impact RNA base-pairings, recognition by proteins, decoding, as well as RNA structure and stability. However, their roles in stress, environmental adaptation and during infections caused by pathogenic bacteria have just started to be appreciated. With the development of modern technologies in mass spectrometry and deep sequencing, recent examples of modifications regulating host-pathogen interactions have been demonstrated. They show how RNA modifications can regulate immune responses, antibiotic resistance, expression of virulence genes, and bacterial persistence. Here, we illustrate some of these findings, and highlight the strategies used to characterize RNA modifications, and their potential for new therapeutic applications.

摘要

RNA 修饰参与众多生物过程,并存在于所有 RNA 类别中。这些修饰可以是组成性的,也可以响应适应性过程而被调节。RNA 修饰具有多种功能,因为它们可以影响 RNA 的碱基配对、蛋白质的识别、解码以及 RNA 的结构和稳定性。然而,它们在应激反应、环境适应以及由致病性细菌引起的感染过程中的作用才刚刚开始被认识。随着质谱和深度测序等现代技术的发展,最近已经有一些修饰调节宿主-病原体相互作用的例子被证明。这些例子表明,RNA 修饰如何调节免疫反应、抗生素耐药性、毒力基因的表达和细菌的持久性。在这里,我们举例说明了其中的一些发现,并强调了用于表征 RNA 修饰的策略及其在新的治疗应用中的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1148/8394870/9e9e748c43d1/genes-12-01125-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1148/8394870/07d14c98f524/genes-12-01125-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1148/8394870/d58c804ba060/genes-12-01125-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1148/8394870/9e9e748c43d1/genes-12-01125-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1148/8394870/07d14c98f524/genes-12-01125-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1148/8394870/d58c804ba060/genes-12-01125-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1148/8394870/9e9e748c43d1/genes-12-01125-g003.jpg

相似文献

1
RNA Modifications in Pathogenic Bacteria: Impact on Host Adaptation and Virulence.致病细菌中的 RNA 修饰:对宿主适应和毒力的影响。
Genes (Basel). 2021 Jul 24;12(8):1125. doi: 10.3390/genes12081125.
2
Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS.通过纳升液相色谱/串联质谱法绘制金黄色葡萄球菌 tRNA 中的转录后修饰图谱。
Biochimie. 2019 Sep;164:60-69. doi: 10.1016/j.biochi.2019.07.003. Epub 2019 Jul 8.
3
RNA structures are involved in the thermoregulation of bacterial virulence-associated traits.RNA 结构参与了细菌毒力相关特征的体温调节。
Trends Microbiol. 2015 Aug;23(8):509-18. doi: 10.1016/j.tim.2015.04.004. Epub 2015 May 18.
4
Interplay between iron homeostasis and virulence: Fur and RyhB as major regulators of bacterial pathogenicity.铁稳态与毒力之间的相互作用:Fur和RyhB作为细菌致病性的主要调节因子。
Vet Microbiol. 2015 Aug 31;179(1-2):2-14. doi: 10.1016/j.vetmic.2015.03.024. Epub 2015 Apr 8.
5
Non-coding RNA regulation in pathogenic bacteria located inside eukaryotic cells.真核细胞内致病细菌中的非编码RNA调控
Front Cell Infect Microbiol. 2014 Nov 12;4:162. doi: 10.3389/fcimb.2014.00162. eCollection 2014.
6
Endoribonuclease YbeY Is Essential for RNA Processing and Virulence in Pseudomonas aeruginosa.内切核糖核酸酶 YbeY 对铜绿假单胞菌的 RNA 加工和毒力至关重要。
mBio. 2020 Jun 30;11(3):e00659-20. doi: 10.1128/mBio.00659-20.
7
Regulation of host-pathogen interactions via the post-transcriptional Csr/Rsm system.通过转录后 Csr/Rsm 系统调控宿主-病原体相互作用。
Curr Opin Microbiol. 2018 Feb;41:58-67. doi: 10.1016/j.mib.2017.11.022. Epub 2017 Dec 5.
8
Small RNAs, 5' UTR elements and RNA-binding proteins in intracellular bacteria: impact on metabolism and virulence.细胞内细菌中的小 RNA、5'UTR 元件和 RNA 结合蛋白:对代谢和毒力的影响。
FEMS Microbiol Rev. 2015 May;39(3):331-49. doi: 10.1093/femsre/fuv022.
9
Adaptor Molecules Epitranscriptome Reprograms Bacterial Pathogenicity.衔接分子表观转录组重编程细菌致病性。
Int J Mol Sci. 2021 Aug 5;22(16):8409. doi: 10.3390/ijms22168409.
10
RNA modification enzymes encoded by the gid operon: Implications in biology and virulence of bacteria.由gid操纵子编码的RNA修饰酶:对细菌生物学特性和毒力的影响
Microb Pathog. 2015 Dec;89:100-7. doi: 10.1016/j.micpath.2015.09.008. Epub 2015 Sep 28.

引用本文的文献

1
RNA modification is the mark and strategy for host-microbe interactions.RNA修饰是宿主与微生物相互作用的标志和策略。
Cell Mol Life Sci. 2025 Aug 8;82(1):306. doi: 10.1007/s00018-025-05842-2.
2
Coupling tRNAGly gene redundancy with staphylococcal cell wall integrity, antibiotic susceptibility, and virulence potential.将甘氨酰tRNA基因冗余与葡萄球菌细胞壁完整性、抗生素敏感性和毒力潜力联系起来。
Nucleic Acids Res. 2025 Jul 8;53(13). doi: 10.1093/nar/gkaf599.
3
Bacterial ribosome heterogeneity facilitates rapid response to stress.细菌核糖体的异质性有助于对压力做出快速反应。

本文引用的文献

1
Chemical Probe-Based Nanopore Sequencing to Selectively Assess the RNA Modifications.基于化学探针的纳米孔测序选择性评估 RNA 修饰。
ACS Chem Biol. 2022 Oct 21;17(10):2704-2709. doi: 10.1021/acschembio.2c00221. Epub 2022 Oct 3.
2
Impact of pseudouridylation, substrate fold, and degradosome organization on the endonuclease activity of RNase E.假尿嘧啶核苷化、底物折叠和核酸外切酶体组织对 RNase E 的内切酶活性的影响。
RNA. 2021 Nov;27(11):1339-1352. doi: 10.1261/rna.078840.121. Epub 2021 Aug 2.
3
Polyamines are Required for tRNA Anticodon Modification in Escherichia coli.
J Bacteriol. 2025 Jun 24;207(6):e0005825. doi: 10.1128/jb.00058-25. Epub 2025 Jun 3.
4
Unravelling Prokaryotic Codon Usage: Insights from Phylogeny, Influencing Factors and Pathogenicity.解析原核生物密码子使用情况:来自系统发育、影响因素及致病性的见解
Curr Genomics. 2025;26(2):81-94. doi: 10.2174/0113892029325491240919151045. Epub 2024 Oct 1.
5
TlyA is a 23S and 16S 2'-O-methylcytidine methyltransferase important for ribosome assembly in .TlyA是一种对[具体生物名称]中的核糖体组装很重要的23S和16S 2'-O-甲基胞苷甲基转移酶。 (注:原文中“in”后面缺少具体生物名称)
bioRxiv. 2025 Apr 25:2025.04.21.649808. doi: 10.1101/2025.04.21.649808.
6
A small RNA from epidemic ST7 strain promotes bacterial survival in host blood and brain by enhancing oxidative stress resistance.来自流行ST7菌株的一种小RNA通过增强抗氧化应激能力促进细菌在宿主血液和大脑中的存活。
Virulence. 2025 Dec;16(1):2491635. doi: 10.1080/21505594.2025.2491635. Epub 2025 Apr 16.
7
Are Bacterial Processes Dependent on Global Ribosome Pausing Affected by tRNA Modification Defects?细菌过程是否依赖于受tRNA修饰缺陷影响的全局核糖体暂停?
J Mol Biol. 2025 Aug 15;437(16):169107. doi: 10.1016/j.jmb.2025.169107. Epub 2025 Apr 10.
8
Direct RNA sequencing of the Escherichia coli epitranscriptome uncovers alterations under heat stress.大肠杆菌表转录组的直接RNA测序揭示了热应激下的变化。
Nucleic Acids Res. 2025 Mar 20;53(6). doi: 10.1093/nar/gkaf175.
9
Emerging Orchestrator of Ecological Adaptation: mA Regulation of Post-Transcriptional Mechanisms.生态适应的新兴调控因子:转录后机制的 mA 调控
Mol Ecol. 2024 Oct 5:e17545. doi: 10.1111/mec.17545.
10
Queuosine salvage in Houston 1: a unique evolutionary path.休斯顿 1 号中的 Queuosine 挽救:一条独特的进化途径。
Microbiology (Reading). 2024 Sep;170(9). doi: 10.1099/mic.0.001490.
多胺是大肠杆菌 tRNA 反密码子修饰所必需的。
J Mol Biol. 2021 Jul 23;433(15):167073. doi: 10.1016/j.jmb.2021.167073. Epub 2021 May 29.
4
Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing.利用纳米孔测序技术对天然 RNA 中的假尿嘧啶核苷动态进行定量分析。
Nat Biotechnol. 2021 Oct;39(10):1278-1291. doi: 10.1038/s41587-021-00915-6. Epub 2021 May 13.
5
Deciphering Epitranscriptome: Modification of mRNA Bases Provides a New Perspective for Post-transcriptional Regulation of Gene Expression.解读表观转录组:mRNA碱基修饰为基因表达的转录后调控提供了新视角。
Front Cell Dev Biol. 2021 Mar 16;9:628415. doi: 10.3389/fcell.2021.628415. eCollection 2021.
6
Ribosome Rescue Pathways in Bacteria.细菌中的核糖体拯救途径
Front Microbiol. 2021 Mar 18;12:652980. doi: 10.3389/fmicb.2021.652980. eCollection 2021.
7
Analysis of RNA Modifications by Second- and Third-Generation Deep Sequencing: 2020 Update.基于二代和三代高通量测序的 RNA 修饰分析:2020 更新版
Genes (Basel). 2021 Feb 16;12(2):278. doi: 10.3390/genes12020278.
8
N 6-Methyladenosines in mRNAs reduce the accuracy of codon reading by transfer RNAs and peptide release factors.mRNA 中的 N6-甲基腺苷通过转移 RNA 和肽释放因子降低密码子阅读的准确性。
Nucleic Acids Res. 2021 Mar 18;49(5):2684-2699. doi: 10.1093/nar/gkab033.
9
Translational Control by Ribosome Pausing in Bacteria: How a Non-uniform Pace of Translation Affects Protein Production and Folding.细菌中核糖体暂停介导的翻译调控:翻译的非均匀速率如何影响蛋白质的产生和折叠
Front Microbiol. 2021 Jan 11;11:619430. doi: 10.3389/fmicb.2020.619430. eCollection 2020.
10
Structure of Erm-modified 70S ribosome reveals the mechanism of macrolide resistance. Erm 修饰的 70S 核糖体结构揭示了大环内酯类耐药的机制。
Nat Chem Biol. 2021 Apr;17(4):412-420. doi: 10.1038/s41589-020-00715-0. Epub 2021 Jan 18.