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基于遗传微调的X射线图像中新冠肺炎的分类

Classification of COVID-19 in X-ray images with Genetic Fine-tuning.

作者信息

Vieira Pablo A, Magalhães Deborah M V, Carvalho-Filho Antonio O, Veras Rodrigo M S, Rabêlo Ricardo A L, Silva Romuere R V

机构信息

Electrical Engineering, Federal University of Piauí, Teresina, Brazil.

Information Systems, Federal University of Piauí, Picos, Brazil.

出版信息

Comput Electr Eng. 2021 Dec;96:107467. doi: 10.1016/j.compeleceng.2021.107467. Epub 2021 Sep 24.

DOI:10.1016/j.compeleceng.2021.107467
PMID:34584299
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8461268/
Abstract

New and more transmissible SARS-COV-2 variants aggravated the SARS-COV-2 emergence. Lung X-ray images stand out as an alternative to support case screening. The latest computer-aided diagnosis systems have been using Deep Learning (DL) to detect pulmonary diseases. In this context, our work investigates different types of pneumonia detection, including COVID-19, based on X-ray image processing and DL techniques. Our methodology comprehends a pre-processing step including data-augmentation, contrast enhancement, and resizing method to overcome the challenge of heterogeneous and few samples of public datasets. Additionally, we propose a new Genetic Fine-Tuning method to automatically define an optimal set of hyper-parameters of ResNet50 and VGG16 architectures. Our results are encouraging; we achieve an accuracy of 97% considering three classes: COVID-19, other pneumonia, and healthy. Thus, our methodology could assist in classifying COVID-19 pneumonia, which could reduce costs by making the process faster and more efficient.

摘要

新的、更具传播性的严重急性呼吸综合征冠状病毒2(SARS-CoV-2)变种加剧了SARS-CoV-2的出现。肺部X光图像作为支持病例筛查的一种替代方法而备受关注。最新的计算机辅助诊断系统一直在使用深度学习(DL)来检测肺部疾病。在此背景下,我们的工作基于X光图像处理和DL技术,研究包括新冠肺炎在内的不同类型肺炎的检测。我们的方法包括一个预处理步骤,该步骤涵盖数据增强、对比度增强和调整大小方法,以克服公共数据集样本异质性和数量少的挑战。此外,我们提出了一种新的遗传微调方法,以自动定义ResNet50和VGG16架构的一组最优超参数。我们的结果令人鼓舞;考虑新冠肺炎、其他肺炎和健康这三类情况,我们实现了97%的准确率。因此,我们的方法可以帮助对新冠肺炎肺炎进行分类,这可以通过使过程更快、更高效来降低成本。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a7c8e52b9463/gr5_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a3e63560c237/ga1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/584a046f1c3b/gr1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a5e638fde93f/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a0310d89053b/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/c5738990164d/gr4_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a7c8e52b9463/gr5_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a3e63560c237/ga1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/584a046f1c3b/gr1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a5e638fde93f/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a0310d89053b/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/c5738990164d/gr4_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6cd/8461268/a7c8e52b9463/gr5_lrg.jpg

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Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil.巴西玛瑙斯市 P.1 型 SARS-CoV-2 谱系的基因组学和流行病学研究。
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