Notrino Research, ODTÜ Teknokent, Ankara, Turkey.
Department of Medical Imaging Techniques, Akdeniz University, Vocational School of Health Services, Antalya, Turkey.
J Xray Sci Technol. 2021;29(1):19-36. doi: 10.3233/XST-200757.
Chest X-ray imaging has been proved as a powerful diagnostic method to detect and diagnose COVID-19 cases due to its easy accessibility, lower cost and rapid imaging time.
This study aims to improve efficacy of screening COVID-19 infected patients using chest X-ray images with the help of a developed deep convolutional neural network model (CNN) entitled nCoV-NET.
To train and to evaluate the performance of the developed model, three datasets were collected from resources of "ChestX-ray14", "COVID-19 image data collection", and "Chest X-ray collection from Indiana University," respectively. Overall, 299 COVID-19 pneumonia cases and 1,522 non-COVID 19 cases are involved in this study. To overcome the probable bias due to the unbalanced cases in two classes of the datasets, ResNet, DenseNet, and VGG architectures were re-trained in the fine-tuning stage of the process to distinguish COVID-19 classes using a transfer learning method. Lastly, the optimized final nCoV-NET model was applied to the testing dataset to verify the performance of the proposed model.
Although the performance parameters of all re-trained architectures were determined close to each other, the final nCOV-NET model optimized by using DenseNet-161 architecture in the transfer learning stage exhibits the highest performance for classification of COVID-19 cases with the accuracy of 97.1 %. The Activation Mapping method was used to create activation maps that highlights the crucial areas of the radiograph to improve causality and intelligibility.
This study demonstrated that the proposed CNN model called nCoV-NET can be utilized for reliably detecting COVID-19 cases using chest X-ray images to accelerate the triaging and save critical time for disease control as well as assisting the radiologist to validate their initial diagnosis.
由于胸部 X 光成像具有易于获取、成本较低和成像时间快等优点,因此已被证明是一种强大的诊断方法,可用于检测和诊断 COVID-19 病例。
本研究旨在借助开发的名为 nCoV-NET 的深度卷积神经网络模型(CNN)提高使用胸部 X 光图像筛查 COVID-19 感染患者的效果。
为了训练和评估所开发模型的性能,分别从“ChestX-ray14”、“COVID-19 图像数据收集”和“印第安纳大学胸部 X 光收集”资源中收集了三个数据集。总体而言,本研究涉及 299 例 COVID-19 肺炎病例和 1522 例非 COVID-19 病例。为了克服两个数据集类别中病例不平衡可能带来的偏差,在该过程的微调阶段,使用迁移学习方法,重新训练了 ResNet、DenseNet 和 VGG 架构,以区分 COVID-19 类别。最后,将优化的最终 nCoV-NET 模型应用于测试数据集,以验证所提出模型的性能。
尽管所有重新训练的架构的性能参数都非常接近,但在迁移学习阶段使用 DenseNet-161 架构优化的最终 nCOV-NET 模型在 COVID-19 病例分类方面表现出最高的性能,准确率为 97.1%。使用激活映射方法创建激活图,突出显示 X 光片的关键区域,以提高因果关系和可理解性。
本研究表明,称为 nCoV-NET 的所提出的 CNN 模型可用于通过胸部 X 光图像可靠地检测 COVID-19 病例,从而加快分诊并为疾病控制节省关键时间,并协助放射科医生验证其初步诊断。