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pelagi 属,新属,黄杆菌科的一个新成员,从西太平洋分离得到。

Luteirhabdus pelagi gen. nov., sp. nov., a novel member of the family Flavobacteriaceae, isolated from the West Pacific Ocean.

机构信息

Key Laboratory of Marine Ecosystem Dynamics, Ministry of Natural Resources & Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, 310012, People's Republic of China.

College of Life and Environmental Science, Hunan University of Arts and Science, Changde, 415000, People's Republic of China.

出版信息

Arch Microbiol. 2021 Dec;203(10):6021-6031. doi: 10.1007/s00203-021-02557-3. Epub 2021 Oct 26.

Abstract

A Gram-stain-negative, aerobic, and yellow-pigmented bacterium, designated A3-108, was isolated from seawater of the West Pacific Ocean. Cells were non-motile and rod-shaped, with carotenoid-type pigments. Strain A3-108 grew at pH 6.0-8.5 (optimum 6.5) and 15-40 °C (optimum 28 °C), in the presence of 0.5-10% (w/v) NaCl (optimum 1.0%). It possessed the ability to produce HS. Based on the 16S rRNA gene analysis, strain A3-108 exhibited highest similarity with Aureisphaera salina A6D-50 (90.6%). Phylogenetic analysis shown that strain A3-108 affiliated with members of the family Flavobacteriaceae and represented an independent lineage. The principal fatty acids were iso-C, iso-C 3-OH, iso-C G, and summed feature 3 (Cω7c and/or Cω6c). The sole isoprenoid quinone was MK-6. The major polar lipids were phosphatidylethanolamine, one unidentified aminophospholipid, one unidentified aminolipid and one unidentified lipid. The ANIb, in silico DDH and AAI values among the genomes of strain A3-108 and three reference strains were 67.3-71.1%, 18.7-22.1%, and 58.8-71.4%, respectively. The G + C content was 41.0%. Distinctness of the phylogenetic position as well as differentiating chemotaxonomic and other phenotypic traits revealed that strain A3-108 represented a novel genus and species of the family Flavobacteriaceae, for which the name Luteirhabdus pelagi gen. nov., sp. nov. is proposed (type strain, A3-108 = CGMCC 1.18821 = KCTC 82563).

摘要

一株革兰氏阴性、需氧、黄色素产生菌,被命名为 A3-108,从西太平洋海水分离得到。细胞呈杆状,无运动性,具有类胡萝卜素型色素。A3-108 菌株在 pH 值 6.0-8.5(最佳 pH 值 6.5)和 15-40°C(最佳 28°C)、0.5-10%(w/v)NaCl(最佳 1.0%)存在的条件下生长。它具有产生 HS 的能力。基于 16S rRNA 基因分析,菌株 A3-108 与 Aureisphaera salina A6D-50(90.6%)的相似性最高。系统发育分析表明,菌株 A3-108 与黄杆菌科的成员有关,代表一个独立的谱系。主要脂肪酸为 iso-C、iso-C 3-OH、iso-C G 和总和特征 3(Cω7c 和/或 Cω6c)。唯一的异戊烯醌是 MK-6。主要极性脂为磷脂酰乙醇胺、一种未鉴定的氨基磷脂、一种未鉴定的氨基脂和一种未鉴定的脂。A3-108 菌株和三个参考菌株的 ANIb、in silico DDH 和 AAI 值分别为 67.3-71.1%、18.7-22.1%和 58.8-71.4%。G+C 含量为 41.0%。菌株 A3-108 在系统发育位置上的独特性以及区分化学分类学和其他表型特征表明,它代表了黄杆菌科的一个新属和新种,因此命名为 Luteirhabdus pelagi 属。nov.,sp. nov.(模式菌株 A3-108=CGMCC 1.18821=KCTC 82563)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8667/8590676/680a24eeac21/203_2021_2557_Fig1_HTML.jpg

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