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属名. 种名.,新成员 ,从超级虫的肠道中分离出来。

gen. nov., sp. nov., a new member of the family isolated from the gut of a superworm .

机构信息

Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan, ROC.

Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung University of Science and Technology, Taiwan, ROC, No. 142, Hai-Chuan Rd. Nan-Tzu Kaohsiung City 811.

出版信息

Int J Syst Evol Microbiol. 2021 Nov;71(11). doi: 10.1099/ijsem.0.005081.

Abstract

A novel bacterial strain, designated IPMB12, isolated from the gut of the superworm in Taiwan, was characterized using a polyphasic taxonomic approach. Cells were Gram-stain-negative, facultatively anaerobic, non-motile, coccoid or rod-shaped and formed translucent colonies. Optimal growth occurred at 25-37 °C, pH 9-10, and with 0-2 % NaCl. Phylogenetic analyses based on 16S rRNA gene sequences and coding sequences of 92 protein clusters indicated that strain IPMB12 is affiliated with genus in the the family in the class . Strain IPMB12 was most closely related to LMG 29880 with a 94.6 % 16S rRNA gene sequence similarity. Strain IPMB12 showed less than 71.6 % average nucleotide identity, less than 71.5 % average amino acid identity and less than 21.2 % digital DNA-DNA hybridization identity compared to the strains of related genera within the family . The major fatty acids of strain IPMB12 were summed feature 8 (C18 : 17 and/or C18 : 16), C and C. The polar lipid profile consisted of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, one uncharacterized phosphoaminoglycolipid and one uncharacterized aminophospholipid. The major isoprenoid quinone was Q-8. Genomic DNA G+C content of strain IPMB12 was 39.3 mol%. On the basis of phenotypic and genotypic properties and phylogenetic inference, strain IPMB12 represents a novel species of a new genus in the family , for which the name gen. nov., sp. nov. is proposed. The type strain is IPMB12 (=BCRC 80908 =LMG 32079=KCTC 82347=KACC 22323).

摘要

一株从台湾超级虫肠道中分离得到的新型细菌菌株,经多相分类学方法鉴定,命名为 IPMB12。细胞革兰氏染色阴性,兼性厌氧,无动力,球形或杆状,形成半透明菌落。最适生长温度为 25-37°C,pH9-10,0-2%NaCl。基于 16S rRNA 基因序列和 92 个蛋白簇编码序列的系统发育分析表明,菌株 IPMB12 属于 科中的 属。菌株 IPMB12 与 LMG 29880 的 16S rRNA 基因序列相似性最高,为 94.6%。与该科中相关属的菌株相比,菌株 IPMB12 的平均核苷酸同一性小于 71.6%,平均氨基酸同一性小于 71.5%,数字 DNA-DNA 杂交同一性小于 21.2%。菌株 IPMB12 的主要脂肪酸为 summed feature 8 (C18:17 和/或 C18:16)、C 和 C。极性脂谱由磷脂酰乙醇胺、磷脂酰甘油、双磷脂酰甘油、一种未鉴定的磷酸氨基糖脂和一种未鉴定的氨基磷脂组成。主要的异戊二烯醌为 Q-8。菌株 IPMB12 的基因组 DNA G+C 含量为 39.3 mol%。基于表型和基因型特征以及系统发育推断,菌株 IPMB12 代表了 科中新属的一个新种,建议将其命名为 属,种名暂定为 。模式菌株为 IPMB12(=BCRC 80908=LMG 32079=KCTC 82347=KACC 22323)。

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