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利用俄克拉荷马城的 SARS-CoV-2 污水监测数据预测不同人群中的 COVID-19 病例。

Predicting COVID-19 cases in diverse population groups using SARS-CoV-2 wastewater monitoring across Oklahoma City.

机构信息

Department of Biostatistics & Epidemiology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.

Department of Biostatistics & Epidemiology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.

出版信息

Sci Total Environ. 2022 Mar 15;812:151431. doi: 10.1016/j.scitotenv.2021.151431. Epub 2021 Nov 5.

DOI:10.1016/j.scitotenv.2021.151431
PMID:34748841
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8570442/
Abstract

SARS-CoV-2 was discovered among humans in late 2019 and rapidly spread across the world. Although the virus is transmitted by respiratory droplets, most infected persons also excrete viral particles in their feces. This fact prompted a range of studies assessing the usefulness of wastewater surveillance to determine levels of infection and transmission and produce early warnings of outbreaks in local communities, independently of human testing. In this study, we collected samples of wastewater from 13 locations across Oklahoma City, representing different population types, twice per week from November 2020 to end of March 2021. Wastewater samples were collected and analyzed for the presence and concentration of SARS-CoV-2 RNA using RT-qPCR. The concentration of SARS-CoV-2 in the wastewater showed notable peaks, preceding the number of reported COVID-19 cases by an average of one week (ranging between 4 and 10 days). The early warning lead-time for an outbreak or increase in cases was significantly higher in areas with larger Hispanic populations and lower in areas with a higher household income or higher proportion of persons aged 65 years or older. Using this relationship, we predicted the number of cases with an accuracy of 81-92% compared to reported cases. These results confirm the validity and timeliness of using wastewater surveillance for monitoring local disease transmission and highlight the importance of differences in population structures when interpreting surveillance outputs and planning preventive action.

摘要

2019 年末,人类中发现了 SARS-CoV-2 病毒,该病毒迅速在全球范围内传播。尽管该病毒通过呼吸道飞沫传播,但大多数感染的人也会在粪便中排出病毒颗粒。这一事实促使人们进行了一系列研究,评估使用废水监测来确定感染和传播水平,并在当地社区中独立于人体检测产生疫情爆发的早期预警的有效性。在这项研究中,我们从 2020 年 11 月到 2021 年 3 月底,每周两次从俄克拉荷马城的 13 个地点收集了代表不同人群类型的废水样本。使用 RT-qPCR 从废水样本中检测和分析 SARS-CoV-2 RNA 的存在和浓度。废水中 SARS-CoV-2 的浓度显示出明显的高峰,比报告的 COVID-19 病例数提前了平均一周(4-10 天)。在西班牙裔人口较多的地区,疫情或病例增加的预警提前期显著较高,而在家庭收入较高或 65 岁以上人口比例较高的地区则较低。利用这种关系,我们预测的病例数与报告的病例数相比准确率为 81-92%。这些结果证实了使用废水监测来监测当地疾病传播的有效性和及时性,并强调了在解释监测结果和规划预防措施时,人口结构差异的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084b/8570442/b4440b69dde3/gr3_lrg.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084b/8570442/b4440b69dde3/gr3_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084b/8570442/3bbe19f33f20/ga1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084b/8570442/3ec1fc2715a7/gr1_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084b/8570442/d6952a5a26ff/gr2_lrg.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/084b/8570442/b4440b69dde3/gr3_lrg.jpg

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