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使用优化的卷积神经网络在胸部平面X光片中鉴别新型冠状病毒肺炎病情

Differentiation of COVID-19 conditions in planar chest radiographs using optimized convolutional neural networks.

作者信息

Govindarajan Satyavratan, Swaminathan Ramakrishnan

机构信息

Non-Invasive Imaging and Diagnostics Laboratory, Biomedical Engineering Group, Department of Applied Mechanics, Indian Institute of Technology Madras, Chennai, India.

出版信息

Appl Intell (Dordr). 2021;51(5):2764-2775. doi: 10.1007/s10489-020-01941-8. Epub 2020 Nov 6.

Abstract

In this study, an attempt has been made to differentiate Novel Coronavirus-2019 (COVID-19) conditions from healthy subjects in Chest radiographs using a simplified end-to-end Convolutional Neural Network (CNN) model and occlusion sensitivity maps. Early detection and faster automated screening of the COVID-19 patients is essential. For this, the images are considered from publicly available datasets. Significant biomarkers representing critical image features are extracted from CNN by experimentally investigating on cross-validation methods and hyperparameter settings. The performance of the network is evaluated using standard metrics. Perturbation based occlusion sensitivity maps are employed on the features obtained from the classification model to visualise the localization of abnormal areas. Results demonstrate that the simplified CNN model with optimised parameters is able to extract significant features with a sensitivity of 97.35% and F-measure of 96.71% to detect COVID-19 images. The algorithm achieves an Area Under the Curve-Receiver Operating Characteristic score of 99.4% with Matthews correlation coefficient of 0.93. High value of Diagnostic odds ratio is also obtained. Occlusion sensitivity maps provide precise localization of abnormal regions by identifying COVID-19 conditions. As early detection through chest radiographic images are useful for automated screening of the disease, this method appears to be clinically relevant in providing a visual diagnostic solution using a simplified and efficient model.

摘要

在本研究中,已尝试使用简化的端到端卷积神经网络(CNN)模型和遮挡敏感性映射,在胸部X光片中区分新型冠状病毒2019(COVID-19)病例与健康受试者。对COVID-19患者进行早期检测和更快的自动筛查至关重要。为此,从公开可用的数据集中获取图像。通过对交叉验证方法和超参数设置进行实验研究,从CNN中提取代表关键图像特征的重要生物标志物。使用标准指标评估网络的性能。基于扰动的遮挡敏感性映射应用于从分类模型获得的特征,以可视化异常区域的定位。结果表明,具有优化参数的简化CNN模型能够提取重要特征,检测COVID-19图像的灵敏度为97.35%,F值为96.71%。该算法的曲线下面积-接收器操作特征得分达到99.4%,马修斯相关系数为0.93。还获得了较高的诊断优势比。遮挡敏感性映射通过识别COVID-19情况提供异常区域的精确定位。由于通过胸部X光图像进行早期检测有助于对该疾病进行自动筛查,因此该方法似乎在使用简化高效的模型提供视觉诊断解决方案方面具有临床相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87d7/7647189/ef434db7ebbc/10489_2020_1941_Fig1_HTML.jpg

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