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基因组范围鉴定的 ARF 基因家族在 L. 的果脱落过程中提示了一种功能表达模式。

Genome-Wide Identification of ARF Gene Family Suggests a Functional Expression Pattern during Fruitlet Abscission in L.

机构信息

Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Collaborative Innovation Center for Mountain Ecology & Agro-Bioengineering (CICMEAB), Institute of Agro-Bioengineering/College of Life Sciences, Guizhou University, Guiyang 550025, China.

College of Forestry, Guizhou University/Institute for Forest Resources & Environment of Guizhou, Guiyang 550025, China.

出版信息

Int J Mol Sci. 2021 Nov 4;22(21):11968. doi: 10.3390/ijms222111968.

DOI:10.3390/ijms222111968
PMID:34769398
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8584427/
Abstract

Auxin response factors (ARFs) play a vital role in plant growth and development. In the current study, 16 ARF members have been identified in the sweet cherry ( L.) genome. These genes are all located in the nucleus. Sequence analysis showed that genes in the same subgroup have similar exon-intron structures. A phylogenetic tree has been divided into five groups. The promoter sequence includes six kinds of plant hormone-related elements, as well as abiotic stress response elements such as low temperature or drought. The expression patterns of in different tissues, fruitlet abscission, cold and drought treatment were comprehensively analyzed. was up-regulated and was down-regulated in fruitlet abscising. These genes may be involved in the regulation of fruit drop in sweet cherry fruits. This study comprehensively analyzed the bioinformatics and expression pattern of , which can lay the foundation for further understanding the family in plant growth development and fruit abscission.

摘要

生长素响应因子 (ARF) 在植物生长发育中起着至关重要的作用。在本研究中，已在甜樱桃 ( L.) 基因组中鉴定出 16 个 ARF 成员。这些基因均位于细胞核内。序列分析表明，同一亚组内的基因具有相似的外显子-内含子结构。已构建的系统发育树将分为五个组。启动子序列包含六种与植物激素相关的元件，以及低温或干旱等非生物胁迫响应元件。综合分析了 在不同组织、小果脱落、冷和干旱处理中的表达模式。在小果脱落中， 被上调， 被下调。这些基因可能参与了甜樱桃果实落果的调控。本研究综合分析了 的生物信息学和表达模式，可为进一步了解 家族在植物生长发育和果实脱落中的作用奠定基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6a0/8584427/8a88da86150b/ijms-22-11968-g008.jpg
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