Yu Xiaodi, Mullen Tina-Marie, Abrishami Vahid, Huiskonen Juha T, Nemerow Glen R, Reddy Vijay S
Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Department of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037, USA.
J Mol Biol. 2022 Jan 30;434(2):167350. doi: 10.1016/j.jmb.2021.167350. Epub 2021 Nov 10.
Maturation of adenoviruses is distinguished by proteolytic processing of several interior minor capsid proteins and core proteins by the adenoviral protease and subsequent reorganization of adenovirus core. We report the results derived from the icosahedrally averaged cryo-EM structure of a cell entry defective form of adenovirus, designated ts1, at a resolution of 3.7 Å as well as of the localized reconstructions of unique hexons and penton base. The virion structure revealed the structures and organization of precursors of minor capsid proteins, pIIIa, pVI and pVIII, which are closely associated with the hexons on the capsid interior. In addition to a well-ordered helical domain (a.a. 310-397) of pIIIa, highlights of the structure include the precursors of VIII display significantly different structures near the cleavage sites. Moreover, we traced residues 4-96 of the membrane lytic protein (pVI) that includes an amphipathic helix occluded deep in the hexon cavity suggesting the possibility of co-assembly of hexons with the precursors of VI. In addition, we observe a second copy of pVI ordered up to residue L40 in the peripentonal hexons and a few fragments of density corresponding to 2nd and 3rd copies of pVI in other hexons. However, we see no evidence of precursors of VII binding in the hexon cavity. These findings suggest the possibility that differently bound pVI molecules undergo processing at the N-terminal cleavage sites at varying efficiencies, subsequently creating competition between the cleaved and uncleaved forms of VI, followed by reorganization, processing, and release of VI molecules from the hexon cavities.
腺病毒的成熟过程以腺病毒蛋白酶对几种内部次要衣壳蛋白和核心蛋白进行蛋白水解加工以及随后腺病毒核心的重组为特征。我们报告了源自腺病毒细胞进入缺陷型(命名为ts1)的二十面体平均冷冻电镜结构的结果,分辨率为3.7埃,以及独特六邻体和五聚体基座的局部重建结果。病毒粒子结构揭示了次要衣壳蛋白pIIIa、pVI和pVIII前体的结构和组织,它们与衣壳内部的六邻体紧密相关。除了pIIIa的有序螺旋结构域(氨基酸310 - 397)外,该结构的亮点包括VIII前体在切割位点附近显示出显著不同的结构。此外,我们追踪了膜裂解蛋白(pVI)的4 - 96位残基,其中包括一个两性螺旋,该螺旋深藏在六邻体腔内,这表明六邻体与VI前体可能共同组装。此外,我们观察到在五邻体周围的六邻体中,pVI的第二个拷贝有序排列至L40位残基,在其他六邻体中还有一些对应于pVI第二和第三个拷贝的密度片段。然而,我们没有发现VII前体在六邻体腔内结合的证据。这些发现表明,不同结合状态的pVI分子可能以不同效率在N端切割位点进行加工,随后在切割和未切割的VI形式之间产生竞争,接着是VI分子从六邻体腔中重组、加工和释放。