Aka Tutun Das, Saha Urmi, Shati Sayara Akter, Aziz Md Abdul, Begum Mobashera, Hussain Md Saddam, Millat Md Shalahuddin, Uddin Mohammad Sarowar, Islam Mohammad Safiqul
Department of Pharmacy, Faculty of Science, Noakhali Science and Technology University, Sonapur, 3814, Noakhali, Bangladesh.
Laboratory of Pharmacogenomics and Molecular Biology, Department of Pharmacy, Noakhali Science and Technology University, Sonapur, 3814, Noakhali, Bangladesh.
Heliyon. 2021 Nov 17;7(11):e08376. doi: 10.1016/j.heliyon.2021.e08376. eCollection 2021 Nov.
Type 2 diabetes mellitus (T2DM) and cardiovascular disease (CVD) are two deadly diseases caused by the complex interaction of multiple genetic loci, lifestyle and environmental factors. Genome-wide association studies described hundreds of susceptibility loci for T2DM and T2DM-related CVD, but it remains uncertain due to geographic and ethnic variations. The objective of this study was to evaluate the associations of rs5219, rs13266634 and rs1111875 polymorphisms with T2DM and related CVD.
Genotyping of all three polymorphisms was performed using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method on 250 T2DM cases and 246 healthy controls. Both descriptive and inferential statistical methods were applied using MedCalc and IBM SPSS software programs for statistical analyses.
A significantly increased association of KCNJ11 rs5219 (<0.05) with T2DM was found in dominant, recessive, heterozygote, homozygote, and allele model (aOR = 2.23, 2.03, 1.90, 3.09, and 1.80, respectively). For rs13266634, only dominant, heterozygote, and allele model (aOR = 3.37, 3.59, and 1.79, respectively) showed significantly increased association with T2DM. SNP rs1111875 () also revealed 2.08, 4.18, 5.93, and 2.08-times significant association in dominant, recessive, homozygote, and allele models. Besides, a significantly reduced correlation of rs5219 was found with T2DM-related CVD in the recessive and allele model (aOR = 0.40 and 0.65, respectively). Again, a significant difference was observed between T2DM-related CVD and non-CVD patients in terms of gender distribution, fasting blood glucose (FBG), systolic blood pressure (SBP), diastolic blood pressure (DBP), total cholesterol (TC), and triglycerides (TG).
Our investigation indicates that rs5219, rs13266634 and rs1111875 polymorphisms are associated with T2DM. Moreover, rs5219 polymorphism is correlated with the risk of T2DM-related CVD.
2型糖尿病(T2DM)和心血管疾病(CVD)是由多个基因位点、生活方式和环境因素复杂相互作用引起的两种致命疾病。全基因组关联研究描述了数百个T2DM和T2DM相关CVD的易感基因座,但由于地理和种族差异,情况仍不确定。本研究的目的是评估rs5219、rs13266634和rs1111875多态性与T2DM及相关CVD的关联。
采用聚合酶链反应-限制性片段长度多态性(PCR-RFLP)方法对250例T2DM患者和246例健康对照进行所有三种多态性的基因分型。使用MedCalc和IBM SPSS软件程序应用描述性和推断性统计方法进行统计分析。
在显性、隐性、杂合子、纯合子和等位基因模型中,发现KCNJ11 rs5219与T2DM的关联显著增加(<0.05)(优势比分别为2.23、2.03、1.90、3.09和1.80)。对于rs13266634,只有显性、杂合子和等位基因模型(优势比分别为3.37、3.59和1.79)显示与T2DM的关联显著增加。SNP rs1111875在显性、隐性、纯合子和等位基因模型中也显示出2.08、4.18、5.93和2.08倍的显著关联。此外,在隐性和等位基因模型中,发现rs5219与T2DM相关CVD的相关性显著降低(优势比分别为0.40和0.65)。同样,在T2DM相关CVD患者和非CVD患者之间,在性别分布、空腹血糖(FBG)、收缩压(SBP)、舒张压(DBP)、总胆固醇(TC)和甘油三酯(TG)方面观察到显著差异。
我们的研究表明,rs5219、rs13266634和rs1111875多态性与T2DM相关。此外,rs5219多态性与T2DM相关CVD的风险相关。