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2

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本文引用的文献

1

Analysis of vaccine-like lumpy skin disease virus from flies near the western border of China.中国西部边境附近苍蝇中类疫苗性结节性皮肤病病毒的分析。

Transbound Emerg Dis. 2022 Jul;69(4):1813-1823. doi: 10.1111/tbed.14159. Epub 2021 Jun 4.

2

Lumpy skin disease outbreaks in vietnam, 2020.2020 年越南暴发块状皮肤病疫情。

Transbound Emerg Dis. 2021 May;68(3):977-980. doi: 10.1111/tbed.14022. Epub 2021 Feb 21.

3

Analysis and insights into recombination signals in lumpy skin disease virus recovered in the field.对田间分离的牛结节疹病毒重组信号的分析与研究。

PLoS One. 2018 Dec 12;13(12):e0207480. doi: 10.1371/journal.pone.0207480. eCollection 2018.

4

Complete Genome Sequence of the Lumpy Skin Disease Virus Isolated from the First Reported Case in Greece in 2015.2015年从希腊首例报告病例中分离出的结节性皮肤病病毒的全基因组序列

Genome Announc. 2017 Jul 20;5(29):e00550-17. doi: 10.1128/genomeA.00550-17.

5

LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets.LoFreq：一种序列质量感知的超灵敏变异 caller，可从高通量测序数据集中揭示细胞群体异质性。

Nucleic Acids Res. 2012 Dec;40(22):11189-201. doi: 10.1093/nar/gks918. Epub 2012 Oct 12.

6

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用

J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.

7

NCBI BLAST: a better web interface.美国国立生物技术信息中心基本局部比对搜索工具：一个更好的网络界面。

Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W5-9. doi: 10.1093/nar/gkn201. Epub 2008 Apr 24.

8

Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome.基因组注释转移工具（GATU）：利用密切相关的参考基因组对病毒基因组进行快速注释。

BMC Genomics. 2006 Jun 13;7:150. doi: 10.1186/1471-2164-7-150.

2020年从越南北部四次疫情中收集的重组牛结节性皮肤病病毒的编码完整序列。

Coding-Complete Sequences of Recombinant Lumpy Skin Disease Viruses Collected in 2020 from Four Outbreaks in Northern Vietnam.

作者信息

Mathijs Elisabeth, Vandenbussche Frank, Nguyen Long, Aerts Laetitia, Nguyen Tho, De Leeuw Ilse, Quang Minh, Nguyen Hoang Dang, Philips Wannes, Dam Thi Vui, Haegeman Andy, Van Borm Steven, De Clercq Kris

机构信息

Sciensano, Exotic Viruses and Particular Diseases Unit, Ukkel, Belgium.

Department of Animal Health (DAH), Ministry of Agriculture and Rural Development, Phuong Dinh, Dong Da, Hanoi, Vietnam.

出版信息

Microbiol Resour Announc. 2021 Dec 2;10(48):e0089721. doi: 10.1128/MRA.00897-21.

DOI:10.1128/MRA.00897-21

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8638603/

Abstract

(LSDV) causes a severe, systemic, and economically important disease in cattle. Here, we report coding-complete sequences of recombinant LSDVs from four outbreaks in October and November 2020 in northeastern Vietnam.

摘要

牛结节性皮肤病病毒（LSDV）可在牛群中引发一种严重的、全身性且具有重要经济影响的疾病。在此，我们报告了2020年10月和11月在越南北部四个疫情点分离出的重组牛结节性皮肤病病毒的编码完整序列。