Murugesan Selvasankar, Elanbari Mohammed, Bangarusamy Dhinoth Kumar, Terranegra Annalisa, Al Khodor Souhaila
Mother and Child Health Department, Sidra Medicine, Doha, Qatar.
Clinical Research Center Department, Sidra Medicine, Doha, Qatar.
Front Microbiol. 2021 Dec 10;12:772736. doi: 10.3389/fmicb.2021.772736. eCollection 2021.
Many studies have linked dysbiosis of the gut microbiome to the development of cardiovascular diseases (CVD). However, studies assessing the association between the salivary microbiome and CVD risk on a large cohort remain sparse. This study aims to identify whether a predictive salivary microbiome signature is associated with a high risk of developing CVD in the Qatari population. Saliva samples from 2,974 Qatar Genome Project (QGP) participants were collected from Qatar Biobank (QBB). Based on the CVD score, subjects were classified into low-risk (LR < 10) ( = 2491), moderate-risk (MR = 10-20) ( = 320) and high-risk (HR > 30) ( = 163). To assess the salivary microbiome (SM) composition, 16S-rDNA libraries were sequenced and analyzed using QIIME-pipeline. Machine Learning (ML) strategies were used to identify SM-based predictors of CVD risk. and were the predominant phyla among all the subjects included. Linear Discriminant Analysis Effect Size (LEfSe) analysis revealed that and were the most significantly abundant genera in the LR group, while and were significantly abundant in the HR group. ML based prediction models revealed that , and were the common predictors of increased risk to CVD. This study identified significant differences in the SM composition in HR and LR CVD subjects. This is the first study to apply ML-based prediction modeling using the SM to predict CVD in an Arab population. More studies are required to better understand the mechanisms of how those microbes contribute to CVD.
许多研究已将肠道微生物群失调与心血管疾病(CVD)的发生联系起来。然而,在大型队列中评估唾液微生物群与CVD风险之间关联的研究仍然很少。本研究旨在确定在卡塔尔人群中,预测性唾液微生物群特征是否与发生CVD的高风险相关。从卡塔尔生物样本库(QBB)收集了2974名卡塔尔基因组计划(QGP)参与者的唾液样本。根据CVD评分,受试者被分为低风险(LR<10)(n = 2491)、中度风险(MR = 10 - 20)(n = 320)和高风险(HR>30)(n = 163)。为了评估唾液微生物群(SM)组成,使用QIIME流程对16S - rDNA文库进行测序和分析。采用机器学习(ML)策略来识别基于SM的CVD风险预测指标。在所有纳入的受试者中,厚壁菌门和拟杆菌门是主要的菌门。线性判别分析效应大小(LEfSe)分析显示,在低风险组中,普雷沃氏菌属和链球菌属是最显著丰富的属,而在高风险组中,韦荣球菌属和纤毛菌属显著丰富。基于ML的预测模型显示,普雷沃氏菌属、链球菌属和韦荣球菌属是CVD风险增加的常见预测指标。本研究确定了高风险和低风险CVD受试者的SM组成存在显著差异。这是第一项在阿拉伯人群中应用基于ML的预测模型,利用SM来预测CVD的研究。需要更多研究来更好地理解这些微生物导致CVD的机制。