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马西利氏阿拉伯菌属 (Arabiibacter) 是一种新的、从人类肠道中分离出来的、专性厌氧菌。

Arabiibacter massiliensis gen. nov. sp. nov., New Anaerobic Bacterium Isolated from the Human Gut.

机构信息

UMR VITROME, Aix Marseille Univ, IRD, AP-HM, SSA, Marseille, France.

IHU-Méditerranée Infection, Marseille, France.

出版信息

Curr Microbiol. 2022 Jan 4;79(2):47. doi: 10.1007/s00284-021-02739-8.

Abstract

Using microbial culturomics, we were able to isolate strain Marseille-P3078 from a stool sample of a healthy 50-year-old Saudi Arabian woman. To this end, we used taxonogenomics that combines phenotypic, biochemical and genomic analyses, to describe this bacterium. Cells from strain Marseille-P3078 are anaerobic and Gram-negative rods that are motile and unable to sporulate. Its genome size is 3,377,914-bp-long with a 66.33 mol% G + C content. Based on its phenotypic and genomic features, including a 94.6% 16S rRNA similarity with Paraeggerthella hongkongensis strain JCM 14552, its closest phylogenetic neighbor withstanding in nomenclature, we propose that strain Marseille-P3078T (= CSUR P3078 = DSM 104007) is the representative strain of a new genus for which we propose the name Arabiibacter massiliensis gen. nov., sp. nov.

摘要

利用微生物培养组学,我们从一名 50 岁沙特阿拉伯健康女性的粪便样本中分离出了一株马赛 P3078 菌株。为此,我们采用了分类基因组学,将表型、生化和基因组分析相结合,来描述这种细菌。马赛 P3078 菌株的细胞为厌氧革兰氏阴性棒状,能运动但不能形成孢子。其基因组大小为 3,377,914-bp,G+C 含量为 66.33 mol%。基于其表型和基因组特征,包括与 Paraeggerthella hongkongensis 菌株 JCM 14552 的 16S rRNA 相似性为 94.6%,这是其在命名上最接近的系统发育邻居,我们建议将马赛 P3078T 株(= CSUR P3078 = DSM 104007)作为一个新属的代表菌株,我们提议将其命名为 Arabiibacter massiliensis gen. nov.,sp. nov.。

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