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电遗传信号在共培养物中的传输和传播指导酪氨酸小分子的产生。

Electrogenetic Signal Transmission and Propagation in Coculture to Guide Production of a Small Molecule, Tyrosine.

机构信息

Fischell Department of Bioengineering, University of Maryland, College Park, Maryland 20742, United States.

Institute for Bioscience and Biotechnology Research, University of Maryland, College Park, Maryland 20742, United States.

出版信息

ACS Synth Biol. 2022 Feb 18;11(2):877-887. doi: 10.1021/acssynbio.1c00522. Epub 2022 Feb 3.

Abstract

There are many strategies to actuate and control genetic circuits, including providing stimuli like exogenous chemical inducers, light, magnetic fields, and even applied voltage, that are orthogonal to metabolic activity. Their use enables actuation of gene expression for the production of small molecules and proteins in many contexts. Additionally, there are a growing number of reports wherein cocultures, consortia, or even complex microbiomes are employed for the production of biologics, taking advantage of an expanded array of biological function. Combining stimuli-responsive engineered cell populations enhances design space but increases complexity. In this work, we co-opt nature's redox networks and electrogenetically route control signals into a consortium of microbial cells engineered to produce a model small molecule, tyrosine. In particular, we show how electronically programmed short-lived signals (i.e., hydrogen peroxide) can be transformed by one population and propagated into sustained longer-distance signals that, in turn, guide tyrosine production in a second population building on bacterial quorum sensing that coordinates their collective behavior. Two design methodologies are demonstrated. First, we use electrogenetics to transform redox signals into the quorum sensing autoinducer, AI-1, that, in turn, induces a tyrosine biosynthesis pathway transformed into a second population. Second, we use the electrogenetically stimulated AI-1 to actuate expression of , boosting the growth rate of tyrosine-producing cells, augmenting both their number and metabolic activity. In both cases, we show how signal propagation within the coculture helps to ensure tyrosine production. We suggest that this work lays a foundation for employing electrochemical stimuli and engineered cocultures for production of molecular products in biomanufacturing environments.

摘要

有许多策略可以激活和控制基因回路,包括提供外源化学诱导物、光、磁场,甚至外加电压等与代谢活性正交的刺激。它们的使用可以在许多情况下激活基因表达,从而产生小分子和蛋白质。此外,越来越多的报告利用扩大的生物功能,采用共培养物、联合体甚至复杂微生物组来生产生物制剂。结合对刺激反应的工程细胞群体可以增强设计空间,但会增加复杂性。在这项工作中,我们利用了自然界的氧化还原网络,并将电控制信号电传入到一个经过工程改造的微生物细胞联合体中,以生产一种模型小分子酪氨酸。具体来说,我们展示了如何将电子编程的短寿命信号(即过氧化氢)转化为一种群体,并将其传播为持续的远距离信号,从而指导第二个群体中的酪氨酸生产,该群体基于细菌群体感应来协调其集体行为。展示了两种设计方法。首先,我们使用电遗传学将氧化还原信号转化为群体感应自动诱导物 AI-1,然后 AI-1 诱导转化的酪氨酸生物合成途径进入第二个群体。其次,我们使用电刺激的 AI-1 来激活表达 ,从而提高产酪氨酸细胞的增长率,增加其数量和代谢活性。在这两种情况下,我们都展示了共培养物中的信号传播如何有助于确保酪氨酸的生产。我们认为这项工作为在生物制造环境中使用电化学刺激和工程共培养物生产分子产品奠定了基础。

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