Krieg Steven J, Avendano Carolina, Grantham-Brown Evan, Lilienfeld Asbun Aaron, Schnur Jennifer J, Miranda Marie Lynn, Chawla Nitesh V
Lucy Family Institute for Data and Society, University of Notre Dame, Notre Dame, IN, 46556, USA.
Children's Environmental Health Initiative, University of Notre Dame, Notre Dame, IN, 46556, USA.
NPJ Digit Med. 2022 Feb 11;5(1):17. doi: 10.1038/s41746-022-00562-4.
COVID-19 remains a global threat in the face of emerging SARS-CoV-2 variants and gaps in vaccine administration and availability. In this study, we analyze a data-driven COVID-19 testing program implemented at a mid-sized university, which utilized two simple, diverse, and easily interpretable machine learning models to predict which students were at elevated risk and should be tested. The program produced a positivity rate of 0.53% (95% CI 0.34-0.77%) from 20,862 tests, with 1.49% (95% CI 1.15-1.89%) of students testing positive within five days of the initial test-a significant increase from the general surveillance baseline, which produced a positivity rate of 0.37% (95% CI 0.28-0.47%) with 0.67% (95% CI 0.55-0.81%) testing positive within five days. Close contacts who were predicted by the data-driven models were tested much more quickly on average (0.94 days from reported exposure; 95% CI 0.78-1.11) than those who were manually contact traced (1.92 days; 95% CI 1.81-2.02). We further discuss how other universities, business, and organizations could adopt similar strategies to help quickly identify positive cases and reduce community transmission.
面对新出现的严重急性呼吸综合征冠状病毒2(SARS-CoV-2)变体以及疫苗接种和可及性方面的差距,2019冠状病毒病(COVID-19)仍然是一个全球威胁。在本研究中,我们分析了一所中型大学实施的一个数据驱动的COVID-19检测项目,该项目利用了两个简单、多样且易于解释的机器学习模型来预测哪些学生风险较高并应接受检测。该项目在20862次检测中阳性率为0.53%(95%置信区间0.34 - 0.77%),在初次检测后五天内1.49%(95%置信区间1.15 - 1.89%)的学生检测呈阳性,这比一般监测基线有显著增加,一般监测基线的阳性率为0.37%(95%置信区间0.28 - 0.47%),在五天内0.67%(95%置信区间0.55 - 0.81%)检测呈阳性。数据驱动模型预测的密切接触者平均检测速度(自报告接触起0.94天;95%置信区间0.78 - 1.11)比人工接触追踪的密切接触者(1.92天;95%置信区间1.81 - 2.02)快得多。我们进一步讨论了其他大学、企业和组织如何能够采用类似策略来帮助快速识别阳性病例并减少社区传播。