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中国乳腺炎相关 27 样菌株的分类及 新种和 新种的描述。

Classification of 27 -Like Isolates Associated with Mastitis in China and Descriptions of sp. nov. and sp. nov.

机构信息

Department of Clinical Laboratory, the Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangdong Provincial Hospital of Traditional Chinese Medicine, Guangzhou, Guangdong, China.

The Second Clinical College, Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, China.

出版信息

Microbiol Spectr. 2022 Apr 27;10(2):e0137221. doi: 10.1128/spectrum.01372-21. Epub 2022 Mar 15.

Abstract

, particularly Corynebacterium kroppenstedtii, has been increasingly recognized as an important pathogen causing mastitis. However, no clear taxonomic, microbiological, or clinical identification for C. kroppenstedtii-related species is recognized. During the investigation of isolates cultured from female patients with mastitis, 27 lipophilic -like isolates were obtained from clinical breast specimens from 2017 to 2019 in Guangzhou, China. These isolates were identified by phenotypic characterization, matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS), partial sequencing of the 16S rRNA, , and genes, and whole-genome sequencing methods. By phylogenetic analyses, two major clusters were identified that were closely related to DSM 44385. Comparative genome analyses suggested that these isolates formed two distinct genospecies within the genus . The digital DNA-DNA hybridization (dDDH) values for the two genospecies were 45.5 to 47.8% between them and 47.4 to 47.7% and 49.9% to DSM 44385, respectively. Based on these results, it can be concluded that these isolates need to be recognized as two new species of the genus , for which we proposed the names Corynebacterium parakroppenstedtii sp. nov. and Corynebacterium pseudokroppenstedtii sp. nov. The type strain for the novel species is MC-26 (NBRC 115146; CCTCC AB 2020210), and that for is MC-17X (NBRC 115143; CCTCC AB 2020199). In this study, we characterized two novel species that were closely related to but hard to distinguish from . by routine identification methods used in clinical laboratories. Since all 27 -like isolates were obtained from breast specimens of female patients with mastitis, they may be potential pathogens causing mastitis. We hope to perform further epidemiological investigation of these strains and explore their role in mastitis.

摘要

,特别是科氏棒状杆菌,已被越来越多地认为是引起乳腺炎的重要病原体。然而,对于与科氏棒状杆菌相关的种,目前还没有明确的分类学、微生物学或临床鉴定。在对 2017 年至 2019 年广州女性乳腺炎患者培养的分离株进行调查时,从临床乳房标本中获得了 27 株亲脂样分离株。这些分离株通过表型特征、基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)、16S rRNA 基因、部分 基因和全基因组测序方法进行鉴定。通过系统发育分析,鉴定出两个主要聚类,它们与 DSM 44385 密切相关。比较基因组分析表明,这些分离株在棒状杆菌属内形成了两个不同的种。两个种间的数字 DNA-DNA 杂交(dDDH)值为 45.5%至 47.8%,与 DSM 44385 的 dDDH 值分别为 47.4%至 47.7%和 49.9%。基于这些结果,可以得出结论,这些分离株需要被确认为棒状杆菌属的两个新种,我们分别将它们命名为科氏假棒状杆菌新种和科氏副棒状杆菌新种。新型种 MC-26(NBRC 115146;CCTCC AB 2020210)的模式菌株和新型种 MC-17X(NBRC 115143;CCTCC AB 2020199)的模式菌株。在本研究中,我们通过临床实验室常用的常规鉴定方法,对与 密切相关但难以区分的两个新种进行了特征描述。由于所有 27 株亲脂样分离株均从乳腺炎女性患者的乳房标本中获得,它们可能是引起乳腺炎的潜在病原体。我们希望对这些菌株进行进一步的流行病学调查,并探讨它们在乳腺炎中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d24/9045094/7f0c44fdf1a0/spectrum.01372-21-f001.jpg

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