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核磁共振代谢组学的实际再现性评估

A Real-Life Reproducibility Assessment for NMR Metabolomics.

作者信息

Stavarache Cristina, Nicolescu Alina, Duduianu Cătălin, Ailiesei Gabriela Liliana, Balan-Porcăraşu Mihaela, Cristea Mihaela, Macsim Ana-Maria, Popa Oana, Stavarache Carmen, Hîrtopeanu Anca, Barbeş Lucica, Stan Raluca, Iovu Horia, Deleanu Calin

机构信息

"C.D. Nenitescu" Centre of Organic Chemistry, Romanian Academy, 060023 Bucharest, Romania.

Advanced Polymer Materials Group, University Politehnica of Bucharest, 011061 Bucharest, Romania.

出版信息

Diagnostics (Basel). 2022 Feb 22;12(3):559. doi: 10.3390/diagnostics12030559.

Abstract

Nuclear magnetic resonance (NMR) metabolomics is currently popular enough to attract both specialized and non-specialized NMR groups involving both analytical trained personnel and newcomers, including undergraduate students. Recent interlaboratory studies performed by established NMR metabolomics groups demonstrated high reproducibility of the state-of-the-art NMR equipment and SOPs. There is, however, no assessment of NMR reproducibility when mixing both analytical experts and newcomers. An interlaboratory assessment of NMR quantitation reproducibility was performed using two NMR instruments belonging to different laboratories and involving several operators with different backgrounds and metabolomics expertise for the purpose of assessing the limiting factors for data reproducibility in a multipurpose NMR environment. The variability induced by the operator, automatic pipettes, NMR tubes and NMR instruments was evaluated in order to assess the limiting factors for quantitation reproducibility. The results estimated the expected reproducibility data in a real-life multipurpose NMR laboratory to a maximum 4% variability, demonstrating that the current NMR equipment and SOPs may compensate some of the operator-induced variability.

摘要

核磁共振(NMR)代谢组学目前非常流行,吸引了专业和非专业的NMR团队,其中包括经过分析培训的人员和新手,本科生也参与其中。成熟的NMR代谢组学团队最近进行的实验室间研究表明,最先进的NMR设备和标准操作规程具有很高的重现性。然而,当将分析专家和新手混合在一起时,尚未对NMR的重现性进行评估。为了评估多用途NMR环境中数据重现性的限制因素,使用了两台属于不同实验室的NMR仪器,并让具有不同背景和代谢组学专业知识的多名操作人员参与,进行了NMR定量重现性的实验室间评估。评估了操作人员、自动移液器、NMR管和NMR仪器所引起的变异性,以评估定量重现性的限制因素。结果估计,在实际的多用途NMR实验室中,预期的重现性数据最大变异性为4%,这表明当前的NMR设备和标准操作规程可以补偿一些由操作人员引起的变异性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fbc9/8947115/a3300cd6055f/diagnostics-12-00559-g001.jpg

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