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大豆中类Tubby蛋白的综合分析及其基因在非生物胁迫响应中的作用

Comprehensive Profiling of Tubby-Like Proteins in Soybean and Roles of the Gene in Abiotic Stress Responses.

作者信息

Xu Hong-Ru, Liu Ying, Yu Tai-Fei, Hou Ze-Hao, Zheng Jia-Cheng, Chen Jun, Zhou Yong-Bin, Chen Ming, Fu Jin-Dong, Ma You-Zhi, Wei Wen-Liang, Xu Zhao-Shi

机构信息

College of Agriculture, Yangtze University/Hubei Collaborative Innovation Center for Grain Industry/Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education, Jingzhou, China.

Institute of Crop Science, Chinese Academy of Agricultural Sciences (CAAS)/National Key Facility for Crop Gene Resources and Genetic Improvement, Key Laboratory of Biology and Genetic Improvement of Triticeae Crops, Ministry of Agriculture, Beijing, China.

出版信息

Front Plant Sci. 2022 Apr 25;13:844545. doi: 10.3389/fpls.2022.844545. eCollection 2022.

Abstract

Tubby-like proteins (TLPs) are transcription factors that are widely present in eukaryotes and generally participate in growth and developmental processes. Using genome databases, a total of 22 putative genes were identified in the soybean genome, and unevenly distributed across 13 chromosomes. Phylogenetic analysis demonstrated that the predicted GmTLP proteins were divided into five groups (I-V). Gene structure, protein motifs, and conserved domains were analyzed to identify differences and common features among the GmTLPs. A three-dimensional protein model was built to show the typical structure of TLPs. Analysis of publicly available gene expression data showed that genes were differentially expressed in response to abiotic stresses. Based on those data, was selected to further explore the role of TLPs in soybean drought and salt stress responses. overexpressors had improved tolerance to drought and salt stresses, whereas the opposite was true of -RNAi lines. 3,3-diaminobenzidine and nitro blue tetrazolium staining and physiological indexes also showed that overexpression of enhanced the tolerance of soybean to drought and salt stresses; in addition, downstream stress-responsive genes were upregulated in response to drought and salt stresses. This study provides new insights into the function of GmTLPs in response to abiotic stresses.

摘要

类筒状蛋白(TLPs)是广泛存在于真核生物中的转录因子,通常参与生长和发育过程。利用基因组数据库,在大豆基因组中总共鉴定出22个假定基因,它们不均匀地分布在13条染色体上。系统发育分析表明,预测的GmTLP蛋白被分为五组(I-V)。对基因结构、蛋白质基序和保守结构域进行了分析,以确定GmTLPs之间的差异和共同特征。构建了三维蛋白质模型以展示TLPs的典型结构。对公开可用的基因表达数据进行分析表明,这些基因在对非生物胁迫的响应中存在差异表达。基于这些数据,选择[具体基因名称]进一步探究TLPs在大豆干旱和盐胁迫响应中的作用。[具体基因名称]过表达植株对干旱和盐胁迫的耐受性提高,而RNA干扰株系则相反。3,3-二氨基联苯胺和氮蓝四唑染色以及生理指标也表明,[具体基因名称]的过表达增强了大豆对干旱和盐胁迫的耐受性;此外,下游胁迫响应基因在干旱和盐胁迫下上调。本研究为GmTLPs在响应非生物胁迫中的功能提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7793/9083326/2b7f8be32efa/fpls-13-844545-g001.jpg

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