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异养硝化菌 BQ1 降解异戊二烯过程中外源酯酶和胞内尿烷水解酶的协同作用。

Concerted action of extracellular and cytoplasmic esterase and urethane-cleaving activities during Impranil biodegradation by Alicycliphilus denitrificans BQ1.

机构信息

Departamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, Ave. Universidad 3000. Col. UNAM, 04510, Ciudad de México, México.

Departamento de Ingeniería Química, Facultad de Química, Universidad Nacional Autónoma de México, Ave. Universidad 3000. Col. UNAM, 04510, Ciudad de México, México.

出版信息

Biodegradation. 2022 Aug;33(4):389-406. doi: 10.1007/s10532-022-09989-8. Epub 2022 May 28.

Abstract

The concerted action of commercial esterases, proteases and amidases has been demonstrated to be relevant in polyurethane (PU) degradation by in vitro experiments. However, the spatial and temporal dynamics of these activities during PU biodegradation by PU-degrading bacteria have not been addressed. Here, we examined the capability of Alicycliphilus denitrificans BQ1 to biodegrade the polyester (PS)-PU Impranil, analyzed the temporal and spatial coordination between the extracellular and cytoplasmic esterase and urethane-cleaving activities, and their independent and combined effects on Impranil biodegradation. A. denitrificans BQ1 grew in Impranil, and its clearing was correlated with the cleavage of ester and urethane groups since early times, with decrements of some Impranil compounds and the appearance of biodegradation products. While extracellular esterase was active at early times with its maximum at 18 h, urethanase appeared at this time and increased up to the end of the analysis (48 h), with the cytoplasmic activities behaving similarly but with lower levels than the extracellular ones. Both enzymatic activities exhibited distinct substrate specificity depending on their cellular localization and cultivation times, suggesting they cleave differentially located groups. As the urethane cleavage occurred since early times, when no urethane-cleaving activity was detected, different proteins should be acting at early and late times. In vitro experiments with independent or combined cellular protein fractions supported the previous deduction and confirmed the concerted action of extracellular and cytoplasmic esterase and urethane-cleaving activities. A two-stage process for Impranil degradation by A. denitrificans BQ1 is proposed.

摘要

商业酯酶、蛋白酶和酰胺酶的协同作用已被证明与体外实验中的聚氨酯(PU)降解有关。然而,在可生物降解的细菌通过 PU 降解过程中,这些酶的时空动态尚未得到解决。在这里,我们研究了可生物降解聚酯(PS)-PU Impranil 的脱硫杆菌 BQ1 的能力,分析了细胞外和细胞质酯酶和异氰酸酯裂解酶之间的时空协调及其对 Impranil 生物降解的独立和联合作用。BQ1 在 Impranil 中生长,其清除与酯和异氰酸酯基团的裂解有关,因为早期就有一些 Impranil 化合物的减少和生物降解产物的出现。虽然细胞外酯酶在早期就具有活性,其最大活性在 18 小时,但此时出现了尿酶,并在分析结束时(48 小时)增加,细胞质活性也表现出类似的行为,但活性水平低于细胞外酶。两种酶活性表现出不同的底物特异性,这取决于它们的细胞定位和培养时间,表明它们对不同位置的基团进行切割。由于异氰酸酯的裂解发生在早期,当时没有检测到异氰酸酯裂解酶,因此应该有不同的蛋白质在早期和晚期发挥作用。体外实验用独立或联合的细胞蛋白部分支持了之前的推断,并证实了细胞外和细胞质酯酶和异氰酸酯裂解酶的协同作用。提出了脱硫杆菌 BQ1 降解 Impranil 的两阶段过程。

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