Centre for Biostatistics, Division of Population Health, Health Services Research & Primary Care, School of Health Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester UK.
Centre for Integrated Genomic Medicine, Division of Population Health, Health Services Research & Primary Care, School of Health Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester UK.
Neurobiol Aging. 2022 Sep;117:71-82. doi: 10.1016/j.neurobiolaging.2022.05.005. Epub 2022 May 13.
Identification of shared causal genes between dementia and its related clinical outcomes can help understand shared aetiology and multimorbidity surrounding dementia. We performed the HyPrColoc colocalization analysis to detect possible shared causal genes between dementia or Alzheimer's disease (AD) and 5 selected traits: stroke, diabetes, atherosclerosis, cholesterol level, and alcohol consumption within 601 dementia or AD associated genetic regions using summary results of the UK Biobank genome-wide association studies. Functional analysis was performed on the candidate causal genes to explore potential biological pathways. Rs150562240 in the LPIN3 gene was identified as a candidate shared causal variant across dementia, AD and atherosclerosis. Evidence for pairwise colocalization between dementia and stroke, dementia (or AD) and atherosclerosis, and dementia (or AD) and diabetes was found in 2, 6 and 2 genetic regions respectively. Colocalization signals between diabetes and the other 3 non-dementia/AD traits were detected in 5 regions. The colocalization evidence shown in our study suggested shared aetiology between dementia and related diseases such as stroke, atherosclerosis, and diabetes.
确定痴呆症及其相关临床结局之间的共同因果基因有助于了解痴呆症周围的共同发病机制和多病共存现象。我们使用 HyPrColoc 共定位分析,使用英国生物库全基因组关联研究的汇总结果,在 601 个与痴呆症或阿尔茨海默病 (AD) 相关的遗传区域内,对痴呆症或 AD 与 5 种选定特征(中风、糖尿病、动脉粥样硬化、胆固醇水平和 60 天内饮酒)之间可能存在的共同因果基因进行检测。对候选因果基因进行功能分析,以探索潜在的生物学途径。在 LPIN3 基因中的 Rs150562240 被确定为跨痴呆症、AD 和动脉粥样硬化的候选共同因果变异。在 2、6 和 2 个遗传区域中分别发现了痴呆症与中风、痴呆症(或 AD)与动脉粥样硬化以及痴呆症(或 AD)与糖尿病之间的成对共定位证据。在 5 个区域中检测到糖尿病与其他 3 个非痴呆症/AD 特征之间的共定位信号。我们的研究结果表明,痴呆症与中风、动脉粥样硬化和糖尿病等相关疾病存在共同的发病机制。