• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

对具有降解烷烃和产生生物表面活性剂能力的S8进行全基因组分析,揭示了其对原油分解的遗传适应性。

Complete Genome Analysis of S8 Capable of Degrading Alkanes and Producing Biosurfactant Reveals Its Genetic Adaptation for Crude Oil Decomposition.

作者信息

Delegan Yanina, Petrikov Kirill, Frantsuzova Ekaterina, Rudenko Natalia, Solomentsev Viktor, Suzina Nataliya, Travkin Vasili, Solyanikova Inna P

机构信息

Laboratory of Physiology of Microorganisms, Institute of Biochemistry and Physiology of Microorganisms, Federal Research Center "Pushchino Scientific Center for Biological Research of Russian Academy of Sciences" (FRC PSCBR RAS), 142290 Pushchino, Moscow Region, Russia.

State Research Center for Applied Microbiology and Biotechnology, 142279 Obolensk, Moscow Region, Russia.

出版信息

Microorganisms. 2022 Jun 7;10(6):1172. doi: 10.3390/microorganisms10061172.

DOI:10.3390/microorganisms10061172
PMID:35744693
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9229178/
Abstract

Microorganisms capable of decomposing hydrophobic substrates in cold climates are of considerable interest both in terms of studying adaptive reactions to low temperatures and in terms of their application in biotechnologies for cleaning up oil spills in a crude-oil polluted soil. The aim of this work was to investigate the genome of S8 and explore behavior traits of this strain grown in the presence of hexadecane. The genome size of strain S8 is 8.78 Mb, of which the chromosome size is 7.75 Mb. The S8 strain contains 2 circular plasmids of 135 kb and 105 kb and a linear plasmid with a size of 788 kb. The analysis of the genome revealed the presence of genes responsible for the degradation of alkanes and synthesis of biosurfactants. The peculiarities of morphology of microbial cells when interacting with a hydrophobic substrate were revealed. An adaptive mechanism responsible in the absence of oxygen for maintaining the process of degradation of hexadecane is discussed. The data obtained show that the strain S8 has great potential to be used in biotechnologies.

摘要

在寒冷气候下能够分解疏水性底物的微生物,无论是在研究对低温的适应性反应方面,还是在生物技术中用于清理原油污染土壤中的石油泄漏方面,都具有相当大的研究价值。这项工作的目的是研究S8菌株的基因组,并探索该菌株在十六烷存在下的行为特征。S8菌株的基因组大小为8.78 Mb,其中染色体大小为7.75 Mb。S8菌株包含两个大小分别为135 kb和105 kb的环状质粒以及一个大小为788 kb的线性质粒。基因组分析揭示了负责烷烃降解和生物表面活性剂合成的基因的存在。揭示了微生物细胞与疏水性底物相互作用时的形态学特性。讨论了在无氧条件下维持十六烷降解过程的适应性机制。所获得的数据表明,S8菌株在生物技术中具有巨大的应用潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/a06698fa97d3/microorganisms-10-01172-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/aead2f8696e9/microorganisms-10-01172-g001a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/45c797497c58/microorganisms-10-01172-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/092b2b8c73e6/microorganisms-10-01172-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/d84abc7b839c/microorganisms-10-01172-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/777b4309b11a/microorganisms-10-01172-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/cf662b7202d7/microorganisms-10-01172-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/a06698fa97d3/microorganisms-10-01172-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/aead2f8696e9/microorganisms-10-01172-g001a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/45c797497c58/microorganisms-10-01172-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/092b2b8c73e6/microorganisms-10-01172-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/d84abc7b839c/microorganisms-10-01172-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/777b4309b11a/microorganisms-10-01172-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/cf662b7202d7/microorganisms-10-01172-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/259d/9229178/a06698fa97d3/microorganisms-10-01172-g008.jpg

相似文献

1
Complete Genome Analysis of S8 Capable of Degrading Alkanes and Producing Biosurfactant Reveals Its Genetic Adaptation for Crude Oil Decomposition.对具有降解烷烃和产生生物表面活性剂能力的S8进行全基因组分析,揭示了其对原油分解的遗传适应性。
Microorganisms. 2022 Jun 7;10(6):1172. doi: 10.3390/microorganisms10061172.
2
Characterization of trehalolipid biosurfactant produced by the novel marine strain Rhodococcus sp. SP1d and its potential for environmental applications.新型海洋菌株 Rhodococcus sp. SP1d 所产海藻糖脂生物表面活性剂的特性及其在环境中的应用潜力。
Microb Cell Fact. 2023 Jul 13;22(1):126. doi: 10.1186/s12934-023-02128-9.
3
Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation.比较基因组学与代谢分析揭示了不透明红球菌M213菌株的独特特征,尤其是在萘降解方面。
PLoS One. 2016 Aug 17;11(8):e0161032. doi: 10.1371/journal.pone.0161032. eCollection 2016.
4
Physiological and biochemical characterization and genome analysis of strain 7B capable of crude oil degradation and plant stimulation.具有原油降解和植物促生能力的7B菌株的生理生化特性及基因组分析
Biotechnol Rep (Amst). 2022 May 21;35:e00741. doi: 10.1016/j.btre.2022.e00741. eCollection 2022 Sep.
5
An oil-degrading bacterium: Rhodococcus erythropolis strain 3C-9 and its biosurfactants.一种石油降解细菌:红平红球菌3C-9菌株及其生物表面活性剂。
J Appl Microbiol. 2007 Jun;102(6):1603-11. doi: 10.1111/j.1365-2672.2006.03267.x.
6
Biodegradation of crude oil by a newly isolated strain Rhodococcus sp. JZX-01.一株新分离的罗尔斯通氏菌(Rhodococcus sp. JZX-01)对原油的生物降解作用。
Appl Biochem Biotechnol. 2013 Dec;171(7):1715-25. doi: 10.1007/s12010-013-0451-4. Epub 2013 Aug 31.
7
Enhanced Production of Biosurfactant from Strain Al-Dhabi-130 under Solid-State Fermentation Using Date Molasses from Saudi Arabia for Bioremediation of Crude-Oil-Contaminated Soils.利用沙特阿拉伯的枣蜜糖水在固态发酵下从 Al-Dhabi-130 菌株中增强生物表面活性剂的生产,以用于生物修复受原油污染的土壤。
Int J Environ Res Public Health. 2020 Nov 15;17(22):8446. doi: 10.3390/ijerph17228446.
8
Genome Sequencing Reveals the Potential of sp. HZ01 for Bioremediation.基因组测序揭示了HZ01菌株在生物修复方面的潜力。
Front Microbiol. 2017 Aug 9;8:1507. doi: 10.3389/fmicb.2017.01507. eCollection 2017.
9
Crude Oil Degradation in Temperatures Below the Freezing Point by Bacteria from Hydrocarbon-Contaminated Arctic Soils and the Genome Analysis of sp. AR_OL41.来自受烃污染北极土壤的细菌对低于冰点温度下原油的降解及菌株AR_OL41的基因组分析
Microorganisms. 2023 Dec 30;12(1):79. doi: 10.3390/microorganisms12010079.
10
Biodegradation of Petroleum Hydrocarbons by Actinobacteria and Acinetobacteria Strains Producing Biosurfactant.产生物表面活性剂的放线菌和不动杆菌菌株对石油烃的生物降解作用
Mikrobiol Z. 2016 Nov-Dec;78(6):92-103.

引用本文的文献

1
Identification, Characterization, and Ultrastructure Analysis of the Phenol-Degrading 7Ba and Its Viable but Nonculturable Forms.苯酚降解菌7Ba及其活的非可培养状态的鉴定、特性分析与超微结构研究
Microorganisms. 2024 Dec 22;12(12):2662. doi: 10.3390/microorganisms12122662.
2
Microaerobic degradation of crude oil and long chain alkanes by a new Rhodococcus strain from Gulf of Mexico.从墨西哥湾的一株新罗德里格斯菌对原油和长链烷烃的微需氧降解。
World J Microbiol Biotechnol. 2023 Jul 29;39(10):264. doi: 10.1007/s11274-023-03703-3.
3
Biosurfactant Production by C11 and C27 Isolated from a Biopurification System for Environmental Applications.

本文引用的文献

1
Complete Genome Sequence of Rhodococcus qingshengii VT6, a Promising Degrader of Persistent Pollutants and Putative Biosurfactant-Producing Strain.轻生红球菌VT6的全基因组序列,一种有潜力的持久性污染物降解菌及推测的生物表面活性剂产生菌株
Microbiol Resour Announc. 2022 Feb 17;11(2):e0117921. doi: 10.1128/mra.01179-21. Epub 2022 Feb 10.
2
Asphaltene biotransformation for heavy oil upgradation.用于重油提质的沥青质生物转化
AMB Express. 2021 Sep 7;11(1):127. doi: 10.1186/s13568-021-01285-7.
3
A review on biosurfactants: properties, applications and current developments.
从用于环境应用的生物净化系统中分离出的C11和C27产生生物表面活性剂。
Microorganisms. 2022 Sep 23;10(10):1892. doi: 10.3390/microorganisms10101892.
4
Hydrocarbons Biodegradation by : Assimilation of Hexadecane in Different Aggregate States.碳氢化合物的生物降解:不同聚集态十六烷的同化作用
Microorganisms. 2022 Aug 8;10(8):1594. doi: 10.3390/microorganisms10081594.
生物表面活性剂综述:性质、应用及当前进展
Bioresour Technol. 2021 Jun;330:124963. doi: 10.1016/j.biortech.2021.124963. Epub 2021 Mar 12.
4
Enrichment and key features of a robust and consistent indigenous marine-cognate microbial consortium growing on oily bilge wastewaters.富集和强化一个在含油舱底污水中生长的强壮且稳定的本土海洋相关微生物联合体的关键特征。
Biodegradation. 2020 Apr;31(1-2):91-108. doi: 10.1007/s10532-020-09896-w. Epub 2020 Apr 6.
5
Statistical optimisation of growth conditions and diesel degradation by the Antarctic bacterium, Rhodococcus sp. strain AQ5‒07.南极细菌 Rhodococcus sp. 菌株 AQ5‒07 的生长条件和柴油降解的统计优化。
Extremophiles. 2020 Mar;24(2):277-291. doi: 10.1007/s00792-019-01153-0. Epub 2019 Dec 20.
6
Hydrocarbon degradation potential and competitive persistence of hydrocarbonoclastic bacterium Acinetobacter pittii strain ABC.烃类降解潜力和烃类降解菌不动杆菌 ABC 株的竞争持久性。
Arch Microbiol. 2019 Oct;201(8):1129-1140. doi: 10.1007/s00203-019-01687-z. Epub 2019 Jun 5.
7
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
8
[Morphological, Physiological, and Biochemical Characteristics of a Benzoate-Degrading Strain Rhodococcus opacus 1CP under Stress Conditions].[压力条件下苯甲酸盐降解菌株不透明红球菌1CP的形态、生理和生化特性]
Mikrobiologiia. 2017 Mar-Apr;86(2):188-200.
9
NanoPack: visualizing and processing long-read sequencing data.NanoPack:可视化和处理长读测序数据。
Bioinformatics. 2018 Aug 1;34(15):2666-2669. doi: 10.1093/bioinformatics/bty149.
10
Oil-degrading properties of a psychrotolerant bacterial strain, Rhodococcus sp. Y2-2, in liquid and soil media.一株耐冷细菌 Rhodococcus sp. Y2-2 在液体和土壤介质中的降油性能。
World J Microbiol Biotechnol. 2018 Feb 6;34(2):33. doi: 10.1007/s11274-018-2415-x.