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来自海洋最深处——挑战者深渊的浮游病毒群落。

Virioplankton assemblages from challenger deep, the deepest place in the oceans.

作者信息

Gao Chen, Liang Yantao, Jiang Yong, Paez-Espino David, Han Meiaoxue, Gu Chengxiang, Wang Meiwen, Yang Yumei, Liu Fengjiao, Yang Qingwei, Gong Zheng, Zhang Xinran, Luo Zhixiang, He Hui, Guo Cui, Shao Hongbing, Zhou Chun, Shi Yang, Xin Yu, Xing Jinyan, Tang Xuexi, Qin Qilong, Zhang Yu-Zhong, He Jianfeng, Jiao Nianzhi, McMinn Andrew, Tian Jiwei, Suttle Curtis A, Wang Min

机构信息

College of Marine Life Sciences, Institute of Evolution and Marine Biodiversity, Frontiers Science Center for Deep Ocean Multispheres and Earth System, Key Lab of Polar Oceanography and Global Ocean Change, Ocean University of China, Qingdao 266003, China.

UMT-OUC Joint Center for Marine Studies, Qingdao 266003, China.

出版信息

iScience. 2022 Jun 27;25(8):104680. doi: 10.1016/j.isci.2022.104680. eCollection 2022 Aug 19.

Abstract

Hadal ocean biosphere, that is, the deepest part of the world's oceans, harbors a unique microbial community, suggesting a potential uncovered co-occurring virioplankton assemblage. Herein, we reveal the unique virioplankton assemblages of the Challenger Deep, comprising 95,813 non-redundant viral contigs from the surface to the hadal zone. Almost all of the dominant viral contigs in the hadal zone were unclassified, potentially related to Alteromonadales and Oceanospirillales. 2,586 viral auxiliary metabolic genes from 132 different KEGG orthologous groups were mainly related to the carbon, nitrogen, sulfur, and arsenic metabolism. Lysogenic viral production and integrase genes were augmented in the hadal zone, suggesting the prevalence of viral lysogenic life strategy. Abundant rve genes in the hadal zone, which function as transposase in the caudoviruses, further suggest the prevalence of viral-mediated horizontal gene transfer. This study provides fundamental insights into the virioplankton assemblages of the hadal zone, reinforcing the necessity of incorporating virioplankton into the hadal biogeochemical cycles.

摘要

超深渊海洋生物圈,即世界海洋的最深处,蕴藏着独特的微生物群落,这表明可能存在一个尚未被发现的同时存在的浮游病毒组合。在此,我们揭示了马里亚纳海沟挑战者深渊独特的浮游病毒组合,其中包括从表层到超深渊带的95,813个非冗余病毒重叠群。超深渊带几乎所有占主导地位的病毒重叠群都未被分类,可能与交替单胞菌目和海洋螺菌目有关。来自132个不同KEGG直系同源组的2586个病毒辅助代谢基因主要与碳、氮、硫和砷代谢有关。溶源性病毒产生和整合酶基因在超深渊带增加,这表明病毒溶源性生命策略普遍存在。超深渊带中大量的rve基因(在尾病毒中起转座酶的作用)进一步表明病毒介导的水平基因转移普遍存在。这项研究为超深渊带浮游病毒组合提供了基本见解,强化了将浮游病毒纳入超深渊生物地球化学循环的必要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d86/9356048/0d18a8fb60f1/fx1.jpg

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