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基于深度学习的田间稻穗检测与计数

Field rice panicle detection and counting based on deep learning.

作者信息

Wang Xinyi, Yang Wanneng, Lv Qiucheng, Huang Chenglong, Liang Xiuying, Chen Guoxing, Xiong Lizhong, Duan Lingfeng

机构信息

National Key Laboratory of Crop Genetic Improvement, Agricultural Bioinformatics Key Laboratory of Hubei Province, National Center of Plant Gene Research, College of Engineering, Huazhong Agricultural University, Wuhan, China.

出版信息

Front Plant Sci. 2022 Aug 12;13:966495. doi: 10.3389/fpls.2022.966495. eCollection 2022.

Abstract

Panicle number is directly related to rice yield, so panicle detection and counting has always been one of the most important scientific research topics. Panicle counting is a challenging task due to many factors such as high density, high occlusion, and large variation in size, shape, posture et.al. Deep learning provides state-of-the-art performance in object detection and counting. Generally, the large images need to be resized to fit for the video memory. However, small panicles would be missed if the image size of the original field rice image is extremely large. In this paper, we proposed a rice panicle detection and counting method based on deep learning which was especially designed for detecting rice panicles in rice field images with large image size. Different object detectors were compared and YOLOv5 was selected with MAPE of 3.44% and accuracy of 92.77%. Specifically, we proposed a new method for removing repeated detections and proved that the method outperformed the existing NMS methods. The proposed method was proved to be robust and accurate for counting panicles in field rice images of different illumination, rice accessions, and image input size. Also, the proposed method performed well on UAV images. In addition, an open-access and user-friendly web portal was developed for rice researchers to use the proposed method conveniently.

摘要

穗数直接关系到水稻产量,因此穗检测与计数一直是最重要的科研课题之一。由于密度高、遮挡严重、大小、形状、姿态等变化大等多种因素,穗计数是一项具有挑战性的任务。深度学习在目标检测和计数方面提供了最先进的性能。一般来说,大图像需要调整大小以适应显存。然而,如果原始田间水稻图像的尺寸极大,小穗可能会被遗漏。在本文中,我们提出了一种基于深度学习的水稻穗检测与计数方法,该方法特别设计用于检测大尺寸田间水稻图像中的水稻穗。对不同的目标检测器进行了比较,选择了平均绝对百分比误差为3.44%、准确率为92.77%的YOLOv5。具体来说,我们提出了一种去除重复检测的新方法,并证明该方法优于现有的非极大值抑制方法。所提方法被证明在不同光照、水稻品种和图像输入尺寸的田间水稻图像中计数穗时具有鲁棒性和准确性。此外,该方法在无人机图像上也表现良好。此外,还开发了一个开放获取且用户友好的网络门户,方便水稻研究人员使用所提方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a54/9416702/d9ef6ce27a92/fpls-13-966495-g001.jpg

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