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腾格里热醋菌地下亚种乙酰木聚糖酯酶 N 端区域的功能分析。

Functional analysis of the N-terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis.

机构信息

Division of Life Science, Graduate School of Science and Engineering, Setsunan University, Osaka, Japan.

Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology, Osaka, Japan.

出版信息

FEBS Open Bio. 2022 Oct;12(10):1875-1885. doi: 10.1002/2211-5463.13476. Epub 2022 Sep 20.

Abstract

Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis (TTE0866) has an N-terminal region (NTR; residues 23-135) between the signal sequence (residues 1-22) and the catalytic domain (residues 136-324), which is of unknown function. Our previous study revealed the crystal structure of the wild-type (WT) enzyme containing the NTR and the catalytic domain. Although the structure of the catalytic domain was successfully determined, that of the NTR was undetermined, as its electron density was unclear. In this study, we investigated the role of the NTR through functional and structural analyses of NTR truncation mutants. Based on sequence and secondary structure analyses, NTR was confirmed to be an intrinsically disordered region. The truncation of NTR significantly decreased the solubility of the proteins at low salt concentrations compared with that of the WT. The NTR-truncated mutant easily crystallized in a conventional buffer solution. The crystal exhibited crystallographic properties comparable with those of the WT crystals suitable for structural determination. These results suggest that NTR plays a role in maintaining the solubility and inhibiting the crystallization of the catalytic domain.

摘要

来自地下栖热菌亚种腾冲(TTE0866)的乙酰木聚糖酯酶在信号序列(残基 1-22)和催化结构域(残基 136-324)之间具有未知功能的 N 端区域(NTR;残基 23-135)。我们之前的研究揭示了含有 NTR 和催化结构域的野生型(WT)酶的晶体结构。尽管成功确定了催化结构域的结构,但 NTR 的结构仍未确定,因为其电子密度不清晰。在这项研究中,我们通过对 NTR 截断突变体的功能和结构分析来研究 NTR 的作用。基于序列和二级结构分析,证实 NTR 是一个固有无序区域。与 WT 相比,NTR 的截断显著降低了低盐浓度下蛋白质的溶解度。NTR 截断突变体在常规缓冲液中容易结晶。所得到的晶体表现出与 WT 晶体相当的晶体学性质,适合于结构测定。这些结果表明,NTR 发挥了维持催化结构域的溶解度和抑制其结晶的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef7c/9527590/e2d8d2c00e36/FEB4-12-1875-g002.jpg

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