Changes in the phenotypic susceptibility of isolates to macrolide antimicrobials during the early feeding period following metaphylactic tulathromycin use in western Canadian feedlot calves.

Cattle at high-risk for bovine respiratory disease on entry to western Canadian feedlots are often treated metaphylactically with antimicrobials from the macrolide class. High levels of resistance to macrolides have been reported in isolates from clinical samples, but it is less clear whether this trend extends to the broader feedlot population. The objective was to describe near-term [< 40 days on feed (DOF)] changes in the recovery and susceptibility of isolates from healthy feedlot calves after metaphylactic exposure to tulathromycin. Eight cohorts of 100 calves ( = 800) were sampled deep nasopharyngeal swab at entry processing (, before metaphylaxis, at 1 DOF) and again at 13 DOF. Ten calves from each cohort ( = 80) were randomly sampled a third time at 36 DOF. Recovery of isolates across all cohorts increased over the study period, from 33% (95% CI: 26.5 to 40.2%) at 1 DOF to 75% (95% CI: 71.4 to 78.3%) at 36 DOF. A significant shift in the minimum inhibitory concentration (MIC) distribution of tulathromycin from 1 DOF (MIC ≤ 8 μg/mL) to 13 DOF (MIC > 64 μg/mL) was observed. A subset of 36 isolates from 13 DOF screened for macrolide resistance genes multiplex polymerase chain reaction all harbored the and genes. Recovery of at 13 and 36 DOF did not decline in response to metaphylactic use of tulathromycin; conversely, we inferred the potential for rapid inter-pen spread of a macrolide-resistant clone by 13 DOF in 6 of 8 pens under selective pressure from antimicrobial use.