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从中国浙江省食品和人类沙门氏菌病中分离出的肯塔基血清型和伦敦血清型的基因组特征(2016 - 2021年)

Genomic characterization of serovar Kentucky and London recovered from food and human salmonellosis in Zhejiang Province, China (2016-2021).

作者信息

Fang Lei, Lin Guankai, Li Yi, Lin Qiange, Lou Huihuang, Lin Meifeng, Hu Yuqin, Xie Airong, Zhang Qinyi, Zhou Jiancang, Zhang Leyi

机构信息

Department of Critical Care Medicine, Sir Run Run Shaw Hospital, College of Medicine, Zhejiang University, Hangzhou, China.

Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, China.

出版信息

Front Microbiol. 2022 Aug 4;13:961739. doi: 10.3389/fmicb.2022.961739. eCollection 2022.

Abstract

Increasing human salmonellosis caused by serovar Kentucky and London has raised serious concerns. To better understand possible health risks, insights were provided into specific genetic traits and antimicrobial resistance of 88 representative isolates from human and food sources in Zhejiang Province, China, during 2016-2021. Phylogenomic analysis revealed consistent clustering of isolates into the respective serovar or sequence types, and identified plausible interhost transmission distinct routes. Each serovar exhibited remarkable diversity in host range and disease-causing potential by cgMLST analyses, and approximately half (48.6%, 17/35) of the food isolates were phylogenetically indistinguishable to those of clinical isolates in the same region. . London and . Kentucky harbored serovar-specific virulence genes contributing to their functions in pathogenesis. The overall resistance genotypes correlated with 97.7% sensitivity and 60.2% specificity to the identified phenotypes. Resistance to ciprofloxacin, cefazolin, tetracycline, ampicillin, azithromycin, chloramphenicol, as well as multidrug resistance, was common. High-level dual resistance to ciprofloxacin and cephalosporins in . Kentucky ST198 isolates highlights evolving threats of antibiotic resistance. These findings underscored the necessity for the development of effective strategies to mitigate the risk of food contamination by host-restricted serovars.

摘要

由肯塔基血清型和伦敦血清型引起的人类沙门氏菌病不断增加,引发了严重关注。为了更好地了解可能的健康风险,我们对2016 - 2021年期间从中国浙江省的人类和食物来源中分离出的88株代表性菌株的特定遗传特征和抗菌药物耐药性进行了研究。系统基因组分析揭示了菌株分别聚类为各自的血清型或序列类型,并确定了可能的宿主间传播的不同途径。通过核心多位点序列分型(cgMLST)分析,每种血清型在宿主范围和致病潜力方面都表现出显著的多样性,并且大约一半(48.6%,17/35)的食物分离株在系统发育上与同一地区的临床分离株无法区分。伦敦血清型和肯塔基血清型含有特定血清型的毒力基因,这些基因在其致病过程中发挥作用。总体耐药基因型与所确定表型的敏感性为97.7%、特异性为60.2%相关。对环丙沙星、头孢唑林、四环素、氨苄西林、阿奇霉素、氯霉素以及多重耐药很常见。肯塔基血清型ST198分离株对环丙沙星和头孢菌素高水平的双重耐药突出了抗生素耐药性不断演变的威胁。这些发现强调了制定有效策略以降低宿主限制血清型造成食物污染风险的必要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d67a/9437622/4d4d338d8054/fmicb-13-961739-g0001.jpg

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