Hitomi Kenya, Weng Jieruiyi, Ying Bei-Wen
School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Front Microbiol. 2022 Aug 23;13:948657. doi: 10.3389/fmicb.2022.948657. eCollection 2022.
Colony growth is a common phenomenon of structured populations dispersed in nature; nevertheless, studies on the spatial distribution of colonies are largely insufficient. Here, we performed a systematic survey to address the questions of whether and how the spatial distribution of colonies was influenced by the genome and environment. Six strains carrying either the wild-type or reduced genomes and eight media of varied nutritional richness were used to evaluate the genomic and environmental impacts, respectively. The genome size and nutritional variation contributed to the mean size and total area but not the variation and shape of size distribution of the colonies formed within the identical space and of equivalent spatial density. The spatial analysis by means of the diagram found that the correlation remained nearly constant in common, in comparison to the response decreasing in correlation to genome reduction and nutritional enrichment. Growth analysis at the single colony level revealed positive correlations of the relative growth rate to both the maximal colony size and the area, regardless of the genomic and nutritional variety. This result indicated fast growth for the large space assigned and supported homeostasis in the correlation. Taken together, the spatial distribution of colonies might benefit efficient clonal growth. Although the mechanisms remain unclear, the findings provide quantitative insights into the genomic and environmental contributions to the growth and distribution of spatially or geographically isolated populations.
菌落生长是自然界中分散的结构化种群的一种常见现象;然而,关于菌落空间分布的研究在很大程度上是不足的。在此,我们进行了一项系统调查,以解决菌落的空间分布是否以及如何受到基因组和环境影响的问题。分别使用携带野生型或简化基因组的六种菌株以及八种营养丰富程度不同的培养基来评估基因组和环境的影响。基因组大小和营养变化对在相同空间和等效空间密度下形成的菌落的平均大小和总面积有贡献,但对菌落大小分布的变化和形状没有贡献。通过图表进行的空间分析发现,与基因组减少和营养富集导致的相关性降低相比,常见情况下相关性几乎保持恒定。在单菌落水平上的生长分析表明,无论基因组和营养差异如何,相对生长速率与最大菌落大小和总面积均呈正相关。这一结果表明,在分配的大空间中生长迅速,并支持相关性中的稳态。综上所述,菌落的空间分布可能有利于有效的克隆生长。尽管其机制尚不清楚,但这些发现为基因组和环境对空间或地理上隔离的种群的生长和分布的贡献提供了定量见解。