Department of Interventional Radiology, The First Affiliated Hospital of Zhengzhou University, China.
Interventional Institute of Zhengzhou University, China.
Mol Oncol. 2022 Dec;16(22):4023-4042. doi: 10.1002/1878-0261.13313. Epub 2022 Sep 22.
To accurately predict the prognosis and further improve the clinical outcomes of bladder cancer (BLCA), we leveraged large-scale data to develop and validate a robust signature consisting of small gene sets. Ten machine-learning algorithms were enrolled and subsequently transformed into 76 combinations, which were further performed on eight independent cohorts (n = 1218). We ultimately determined a consensus artificial intelligence-derived gene signature (AIGS) with the best performance among 76 model types. In this model, patients with high AIGS showed a higher risk of mortality, recurrence, and disease progression. AIGS is not only independent of traditional clinical traits [(e.g., American Joint Committee on Cancer (AJCC) stage)] and molecular features (e.g., TP53 mutation) but also demonstrated superior performance to these variables. Comparisons with 58 published signatures also indicated that AIGS possessed the best performance. Additionally, the combination of AIGS and AJCC stage could achieve better performance. Patients with low AIGS scores were sensitive to immunotherapy, whereas patients with high AIGS scores might benefit from seven potential therapeutics: BRD-K45681478, 1S,3R-RSL-3, RITA, U-0126, temsirolimus, MRS-1220, and LY2784544. Additionally, some mutations (TP53 and RB1), copy number variations (7p11.2), and a methylation-driven target were characterized by AIGS-related multi-omics alterations. Overall, AIGS provides an attractive platform to optimize decision-making and surveillance protocol for individual BLCA patients.
为了准确预测膀胱癌(BLCA)的预后并进一步改善临床结局,我们利用大规模数据开发并验证了一个由小基因集组成的稳健特征。我们纳入了 10 种机器学习算法,并将其转化为 76 种组合,进一步在 8 个独立队列(n=1218)中进行了测试。最终,在 76 种模型类型中,我们确定了一种具有最佳性能的共识人工智能衍生基因特征(AIGS)。在该模型中,AIGS 较高的患者具有更高的死亡风险、复发风险和疾病进展风险。AIGS 不仅独立于传统的临床特征(如美国癌症联合委员会(AJCC)分期)和分子特征(如 TP53 突变),而且表现优于这些变量。与 58 个已发表的特征的比较也表明 AIGS 具有最佳性能。此外,AIGS 和 AJCC 分期的组合可以实现更好的性能。AIGS 评分较低的患者对免疫治疗敏感,而 AIGS 评分较高的患者可能受益于七种潜在的治疗药物:BRD-K45681478、1S,3R-RSL-3、RITA、U-0126、替西罗莫司、MRS-1220 和 LY2784544。此外,一些突变(TP53 和 RB1)、拷贝数变异(7p11.2)和一个甲基化驱动的靶点的特征与 AIGS 相关的多组学改变有关。总之,AIGS 为优化个体 BLCA 患者的决策制定和监测方案提供了一个有吸引力的平台。