Department of Pathology, Yijishan Hospital, The First Affiliated Hospital of Wannan Medical College, Wuhu, Anhui 241001, China.
Department of Urology, Hefei Hospital Affiliated to Anhui Medical University (The Second People's Hospital of Hefei), Hefei, Anhui Province 230011, China.
Dis Markers. 2022 Oct 15;2022:8518378. doi: 10.1155/2022/8518378. eCollection 2022.
The differential expressed genes (DEGs) were screened from the gene expression profile GSE30994 related to PRAD and then analyzed by protein-protein interaction (PPI) to screen the hub gene. Subsequently, the relation between hub gene and pan cancers, PRAD prognosis, and immunotherapy was analyzed. Besides, the effects of hub gene on the growth and metastasis of PRAD cell lines and inflammatory factors (IFs) were detected by functional experiments.
276 upregulated and 1,861 downregulated DEGs were analyzed from GSE30994 gene expression profiles. Through enrichment analysis, it was found that upregulated DEGs were significantly enriched in nitric oxide-mediated signal transduction, insulin signaling pathway, etc. Through PPI networks, ARRB2 was determined as the hub gene that was highly expressed in pan cancers, including PRAD, and contributed to poor prognosis of PRAD patients. Immunoassay showed that ARRB2 was associated with B cells, NK cells, endothelial cells, etc. and also connected with tumor-infiltrating lymphocytes (TILs). Next, the signature model analysis revealed that ARRB2 had a clinical value in predicting PRAD prognosis. In functional experiments, ARRB2 was highly expressed in PRAD cell lines, promoted PRAD cell growth and metastasis, and positively associated with IFs.
ARRB2 has a good prognostic ability in PRAD, and it could be a potential target of PRAD immunotherapy, which offers new directions for PRAD research.
从与 PRAD 相关的基因表达谱 GSE30994 中筛选差异表达基因(DEGs),然后通过蛋白质-蛋白质相互作用(PPI)分析筛选出关键基因。随后,分析关键基因与泛癌、PRAD 预后和免疫治疗的关系。此外,通过功能实验检测关键基因对 PRAD 细胞系生长和转移以及炎症因子(IFs)的影响。
从 GSE30994 基因表达谱中分析出 276 个上调和 1861 个下调的 DEGs。通过富集分析,发现上调的 DEGs 显著富集在一氧化氮介导的信号转导、胰岛素信号通路等途径中。通过 PPI 网络,确定 ARRB2 为关键基因,该基因在泛癌中高表达,包括 PRAD,并且与 PRAD 患者的不良预后相关。免疫分析表明,ARRB2 与 B 细胞、NK 细胞、内皮细胞等有关,并且与肿瘤浸润淋巴细胞(TILs)也有关联。接下来,特征模型分析表明,ARRB2 在预测 PRAD 预后方面具有临床价值。在功能实验中,ARRB2 在 PRAD 细胞系中高表达,促进 PRAD 细胞的生长和转移,并且与 IFs 呈正相关。
ARRB2 在 PRAD 中具有良好的预后能力,它可能是 PRAD 免疫治疗的潜在靶点,为 PRAD 研究提供了新的方向。