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ChimeraNet:用于皮肤镜皮肤病变图像中毛发检测的 U-Net。

ChimeraNet: U-Net for Hair Detection in Dermoscopic Skin Lesion Images.

机构信息

Missouri University of Science & Technology, Rolla, MO, 65409, USA.

University of Bejaia, Bejaia, Algeria.

出版信息

J Digit Imaging. 2023 Apr;36(2):526-535. doi: 10.1007/s10278-022-00740-6. Epub 2022 Nov 16.

DOI:10.1007/s10278-022-00740-6
PMID:36385676
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10039207/
Abstract

Hair and ruler mark structures in dermoscopic images are an obstacle preventing accurate image segmentation and detection of critical network features. Recognition and removal of hairs from images can be challenging, especially for hairs that are thin, overlapping, faded, or of similar color as skin or overlaid on a textured lesion. This paper proposes a novel deep learning (DL) technique to detect hair and ruler marks in skin lesion images. Our proposed ChimeraNet is an encoder-decoder architecture that employs pretrained EfficientNet in the encoder and squeeze-and-excitation residual (SERes) structures in the decoder. We applied this approach at multiple image sizes and evaluated it using the publicly available HAM10000 (ISIC2018 Task 3) skin lesion dataset. Our test results show that the largest image size (448 × 448) gave the highest accuracy of 98.23 and Jaccard index of 0.65 on the HAM10000 (ISIC 2018 Task 3) skin lesion dataset, exhibiting better performance than for two well-known deep learning approaches, U-Net and ResUNet-a. We found the Dice loss function to give the best results for all measures. Further evaluated on 25 additional test images, the technique yields state-of-the-art accuracy compared to 8 previously reported classical techniques. We conclude that the proposed ChimeraNet architecture may enable improved detection of fine image structures. Further application of DL techniques to detect dermoscopy structures is warranted.

摘要

毛发和标尺标记结构在皮肤镜图像中是阻碍准确图像分割和关键网络特征检测的因素。从图像中识别和去除毛发可能具有挑战性,尤其是对于那些细小、重叠、褪色或与皮肤颜色相似或覆盖在纹理病变上的毛发。本文提出了一种新的深度学习 (DL) 技术,用于检测皮肤病变图像中的毛发和标尺标记。我们提出的 ChimeraNet 是一种编码器-解码器架构,在编码器中使用预训练的 EfficientNet,在解码器中使用挤压和激励残差 (SERes) 结构。我们在多个图像尺寸上应用了这种方法,并使用公开的 HAM10000(ISIC2018 任务 3)皮肤病变数据集进行了评估。我们的测试结果表明,最大图像尺寸(448×448)在 HAM10000(ISIC 2018 任务 3)皮肤病变数据集上的准确率最高为 98.23,Jaccard 指数为 0.65,优于两种著名的深度学习方法 U-Net 和 ResUNet-a。我们发现 Dice 损失函数在所有指标上都能给出最佳结果。在另外 25 张测试图像上进一步评估,该技术的准确率与之前报道的 8 种经典技术相比达到了最新水平。我们得出结论,所提出的 ChimeraNet 架构可能能够提高对精细图像结构的检测能力。进一步应用 DL 技术来检测皮肤镜结构是必要的。

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本文引用的文献

1
SharpRazor: Automatic removal of hair and ruler marks from dermoscopy images.SharpRazor:自动去除皮肤镜图像中的毛发和标尺标记。
Skin Res Technol. 2023 Apr;29(4):e13203. doi: 10.1111/srt.13203.
2
Generalised Dice Overlap as a Deep Learning Loss Function for Highly Unbalanced Segmentations.广义骰子重叠作为高度不平衡分割的深度学习损失函数
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Cancer Statistics, 2021.癌症统计数据,2021.
CA Cancer J Clin. 2021 Jan;71(1):7-33. doi: 10.3322/caac.21654. Epub 2021 Jan 12.
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Digital hair segmentation using hybrid convolutional and recurrent neural networks architecture.基于混合卷积和循环神经网络架构的数字头发分割。
Comput Methods Programs Biomed. 2019 Aug;177:17-30. doi: 10.1016/j.cmpb.2019.05.010. Epub 2019 May 15.
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Deep Learning and Handcrafted Method Fusion: Higher Diagnostic Accuracy for Melanoma Dermoscopy Images.深度学习与手工制作方法融合:提高黑色素瘤皮肤镜图像的诊断准确率。
IEEE J Biomed Health Inform. 2019 Jul;23(4):1385-1391. doi: 10.1109/JBHI.2019.2891049. Epub 2019 Jan 4.
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Segmentation of Both Diseased and Healthy Skin From Clinical Photographs in a Primary Care Setting.在基层医疗环境中从临床照片对患病皮肤和健康皮肤进行分割
Annu Int Conf IEEE Eng Med Biol Soc. 2018 Jul;2018:3414-3417. doi: 10.1109/EMBC.2018.8512980.
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The HAM10000 dataset, a large collection of multi-source dermatoscopic images of common pigmented skin lesions.HAM10000 数据集,一个大型的常见色素性皮肤病变多源皮肤镜图像集合。
Sci Data. 2018 Aug 14;5:180161. doi: 10.1038/sdata.2018.161.
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DermaKNet: Incorporating the Knowledge of Dermatologists to Convolutional Neural Networks for Skin Lesion Diagnosis.DermaKNet:将皮肤科医生的知识纳入卷积神经网络以进行皮肤损伤诊断。
IEEE J Biomed Health Inform. 2019 Mar;23(2):547-559. doi: 10.1109/JBHI.2018.2806962. Epub 2018 Feb 16.
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Man against machine: diagnostic performance of a deep learning convolutional neural network for dermoscopic melanoma recognition in comparison to 58 dermatologists.人机大战:深度学习卷积神经网络与 58 位皮肤科医生诊断黑色素瘤皮肤镜图像的对比研究
Ann Oncol. 2018 Aug 1;29(8):1836-1842. doi: 10.1093/annonc/mdy166.
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J Am Acad Dermatol. 2018 Feb;78(2):270-277.e1. doi: 10.1016/j.jaad.2017.08.016. Epub 2017 Sep 29.