Santana-Molina Carlos, Del Saz-Navarro DMaría, Devos Damien P
Centro Andaluz de Biología del Desarrollo, Consejo Superior de Investigaciones Científicas, Junta de Andalucía, Universidad Pablo de Olavide, Seville, Spain.
Department of Marine Microbiology and Biogeochemistry, Royal Netherlands Institute for Sea Research (NIOZ), University of Utrecht, Utrecht, Netherlands.
Front Microbiol. 2023 Jan 10;13:1100249. doi: 10.3389/fmicb.2022.1100249. eCollection 2022.
The origin of the FtsZ/tubulin protein family was extremely relevant for life since these proteins are present in nearly all organisms, carrying out essential functions such as cell division or forming a major part of the cytoskeleton in eukaryotes. Therefore, investigating the early evolution of the FtsZ/tubulin protein family could reveal crucial aspects of the diversification of the three domains of life. In this study, we revisited the phylogenies of the FtsZ/tubulin protein family in an extensive prokaryotic diversity, focusing on the main evolutionary events that occurred during its evolution. We found evidence of its early origin in the last universal common ancestor since FtsZ was present in the last common ancestor of Bacteria and Archaea. In bacteria, genes are genomically associated with the bacterial division gene cluster, while in archaea, duplicated prior to archaeal diversification, and one of the copies is associated with protein biosynthesis genes. Archaea have expanded the FtsZ/tubulin protein family with sequences closely related to eukaryotic tubulins. In addition, we report novel CetZ-like groups in Halobacterota and Asgardarchaeota. Investigating the C-termini of prokaryotic paralogs basal to eukaryotic tubulins, we show that archaeal CetZ, as well as the plasmidic TubZ from Firmicutes, most likely originated from archaeal FtsZ. Finally, prokaryotic tubulins are restricted to Odinarchaeaota and species, and they seem to belong to different molecular systems. However, their phylogenies suggest that they are closely related to α/β-tubulins pointing to a potential ancestrality of these eukaryotic paralogs of tubulins.
FtsZ/微管蛋白家族的起源与生命密切相关,因为这些蛋白质几乎存在于所有生物体中,执行着诸如细胞分裂等基本功能,或者在真核生物中构成细胞骨架的主要部分。因此,研究FtsZ/微管蛋白家族的早期进化可以揭示生命三域多样化的关键方面。在这项研究中,我们重新审视了FtsZ/微管蛋白家族在广泛的原核生物多样性中的系统发育,重点关注其进化过程中发生的主要进化事件。我们发现了其在最后一个普遍共同祖先中早期起源的证据,因为FtsZ存在于细菌和古菌的最后共同祖先中。在细菌中,基因在基因组上与细菌分裂基因簇相关联,而在古菌中,在古菌多样化之前发生了复制,其中一个拷贝与蛋白质生物合成基因相关联。古菌通过与真核微管蛋白密切相关的序列扩展了FtsZ/微管蛋白家族。此外,我们报告了盐杆菌纲和阿斯加德古菌纲中新型的CetZ样群体。通过研究真核微管蛋白基部原核旁系同源物的C末端,我们表明古菌的CetZ以及来自厚壁菌门的质粒TubZ最有可能起源于古菌的FtsZ。最后,原核微管蛋白仅限于奥丁古菌纲和某些物种,并且它们似乎属于不同的分子系统。然而,它们的系统发育表明它们与α/β-微管蛋白密切相关,这表明这些微管蛋白的真核旁系同源物具有潜在的祖先关系。