Mitchell Molly, Nguyen Scott V, Connor Mairead, Fairley Derek J, Donoghue Orla, Marshall Helina, Koolman Leonard, McMullan Geoff, Schaffer Kirsten E, McGrath John W, Fanning Séamus
UCD-Centre for Food Safety University College Dublin, Dublin, Ireland.
District of Columbia Department of Forensic Sciences, Public Health Laboratory, Washington, DC, USA.
Int J Syst Evol Microbiol. 2023 Feb;73(1). doi: 10.1099/ijsem.0.005667.
A new species of , a Gram-positive, spore-forming anaerobic group, proposed name sp. nov., was isolated in Northern Ireland from bovine faeces collected in 2016. Designated as MCA3, cells of sp. nov. are rod shaped and motile. Cells tolerate NaCl from 0.5 to 5.5 % (w/v), with a pH tolerance between pH 6 and 9. The optimal temperature for growth is 35-40 °C, and temperatures from 20 to 30 °C are tolerated. The polar lipid profile displays diphosphatidylglycerol, phosphatidylglycerol, two aminoglycolipids, one glycophospholipid, one aminolipid, three glycolipids, five phospholipids and one lipid. No respiratory quinones are detected. The predominant fatty acid profile includes C at 22.8 %. Strain MCA3 is positive for glucose and maltose acidification, as well as glycerol and sorbitol. The biochemical results from a VITEK2 assay of strain MCA3, LAM0A37 and DSM 6539 are also included for the first time. The closed and complete genome of strain MCA3 from a hybrid Oxford Nanopore Technology MinION/Illumina assembly reveals no evidence for known virulence genes. Draft genome sequencing of DSM 6539 and LAM0A37, as performed by Illumina MiSeq, provides reference genomes for these respective species of for the first time. DNA-DNA hybridization values (d) of MCA3 to ATCC 14880, LAM0A37 and DSM 6539 are 48.8, 67.4 and 46.3 %, with cutoff value at 70 %. The type strain for sp. nov. is MCA3 (=NCTC 14625=LMG 32430).
一种新的革兰氏阳性、产芽孢厌氧菌群物种,拟命名为新种,于2016年在北爱尔兰从采集的牛粪便中分离得到。新种被指定为MCA3,其细胞呈杆状且具运动性。细胞能耐受0.5%至5.5%(w/v)的氯化钠,pH耐受范围为pH 6至9。生长的最适温度为35 - 40°C,能耐受20至30°C的温度。极性脂质谱显示有双磷脂酰甘油、磷脂酰甘油、两种氨基糖脂、一种糖磷脂、一种氨基脂、三种糖脂、五种磷脂和一种脂类。未检测到呼吸醌。主要脂肪酸谱中C占22.8%。菌株MCA3对葡萄糖和麦芽糖酸化以及甘油和山梨醇呈阳性反应。还首次纳入了菌株MCA3、LAM0A37和DSM 6539的VITEK2检测生化结果。通过牛津纳米孔技术MinION/Illumina混合组装得到的菌株MCA3的封闭完整基因组未发现已知毒力基因的证据。由Illumina MiSeq进行的DSM 6539和LAM0A37的基因组草图测序首次为这些相应的物种提供了参考基因组。MCA3与ATCC 14880、LAM0A37和DSM 6539的DNA - DNA杂交值(d)分别为48.8%、67.4%和46.3%,截断值为70%。新种的模式菌株为MCA3(=NCTC 14625 = LMG 32430)。