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索拉尼库尔德人和哈瓦兰米库尔德人族群间的遗传多态性与 COVID-19 结局。

Genetic polymorphism between the Sorani and Hawrami kurdish populations and COVID-19 outcome.

机构信息

Medical Laboratory Science Department, Komar University of Science and Technology, Sulaymaniyah, Iraq.

Department of Biology, College of Science, University of Sulaimani, Sulaimaniyah, Iraq.

出版信息

Mol Biol Rep. 2023 Jun;50(6):5177-5183. doi: 10.1007/s11033-023-08448-8. Epub 2023 Apr 29.

Abstract

BACKGROUND

Coronavirus Disease 2019 (COVID-19) is a global pandemic, and mortality and clinical consequences vary across countries. One of the factors influencing COVID-19 outcomes is genetic polymorphism. Two Kurdish populations, Sorani and Hawrami, live in the Sulaimani province of the Kurdistan Region of Iraq. It seems Hawrami had a milder COVID-19 outcome. According to previous research conducted on various ethnic groups across the globe, single nucleotide polymorphisms (SNPs) in the interferon-induced transmembrane protein 3 (IFITM3) and interluken-6 (IL6) genes were associated with the severity of COVID-19 in those populations.

METHODS AND RESULTS

We hypothesized that Hawrami may have protective SNPs. So, in this study, we used DNA sequencing to genotype three IFITM3 SNPs and nine IL6 SNPs by DNA sequencing to investigate the association of Sorani and Hawrami population polymorphisms. Genotype AA for the rs12252 SNP in IFITM3 was insignificantly more common in the Sorani group (54% vs. 44%). The Hawrami population showed a higher percentage of the CC genotype of the rs34481144 SNP in the IFITM3 gene (62% vs. 44.3%) and a higher proportion of the non-risky GG genotype of the rs1800795 SNP in the IL6 gene (53.4 vs. 43.3); however, the SNPs were insignificantly associated between the two populations.

CONCLUSIONS

IFITM3 and IL6 SNPs have no statistically significant association between the two Kurdish populations. The decreased proportion of non-risk alleles at rs34481144 and rs1800795 in the Hawrami population may partially support the research hypothesis. However, contrary to our hypothesis, the Sorani group had an insignificantly higher protective variant of the rs12252 SNP.

摘要

背景

2019 年冠状病毒病(COVID-19)是一场全球性大流行,各国的死亡率和临床后果存在差异。影响 COVID-19 结果的因素之一是遗传多态性。两个库尔德族群,索拉尼(Sorani)和哈瓦拉米(Hawrami),居住在伊拉克库尔德地区的苏莱曼尼省。哈瓦拉米的 COVID-19 结果似乎较为轻微。根据全球不同族群的先前研究,干扰素诱导跨膜蛋白 3(IFITM3)和白细胞介素-6(IL6)基因中的单核苷酸多态性(SNP)与这些族群 COVID-19 的严重程度有关。

方法和结果

我们假设哈瓦拉米可能有保护性 SNP。因此,在这项研究中,我们使用 DNA 测序对 IFITM3 的三个 SNP 和 IL6 的九个 SNP 进行基因分型,以研究索拉尼和哈瓦拉米族群的多态性。IFITM3 中的 rs12252 SNP 的 AA 基因型在索拉尼族群中显著更为常见(54%对 44%)。哈瓦拉米族群中 IFITM3 基因的 rs34481144 SNP 的 CC 基因型比例较高(62%对 44.3%),IL6 基因的 rs1800795 SNP 的非风险 GG 基因型比例较高(53.4%对 43.3%);然而,这两个族群之间的 SNP 无统计学意义的关联。

结论

IFITM3 和 IL6 SNP 之间在这两个库尔德族群中无统计学意义的关联。哈瓦拉米族群中 rs34481144 和 rs1800795 的非风险等位基因比例降低,可能部分支持研究假设。然而,与我们的假设相反,索拉尼族群中 rs12252 SNP 的保护变体比例较高。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75e9/10148000/aebf88071769/11033_2023_8448_Figa_HTML.jpg

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