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一种预测信号序列切割位点的新方法。

A new method for predicting signal sequence cleavage sites.

作者信息

von Heijne G

出版信息

Nucleic Acids Res. 1986 Jun 11;14(11):4683-90. doi: 10.1093/nar/14.11.4683.

DOI:10.1093/nar/14.11.4683
PMID:3714490
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC311474/
Abstract

A new method for identifying secretory signal sequences and for predicting the site of cleavage between a signal sequence and the mature exported protein is described. The predictive accuracy is estimated to be around 75-80% for both prokaryotic and eukaryotic proteins.

摘要

本文描述了一种用于识别分泌信号序列以及预测信号序列与成熟输出蛋白之间切割位点的新方法。对于原核生物和真核生物的蛋白质,预测准确率估计在75%至80%左右。

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1
A new method for predicting signal sequence cleavage sites.一种预测信号序列切割位点的新方法。
Nucleic Acids Res. 1986 Jun 11;14(11):4683-90. doi: 10.1093/nar/14.11.4683.
2
Net N-C charge imbalance may be important for signal sequence function in bacteria.净N-C电荷失衡可能对细菌中的信号序列功能很重要。
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3
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.原核生物和真核生物信号肽的鉴定及其切割位点的预测。
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4
A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.一种用于识别原核和真核信号肽及其切割位点预测的神经网络方法。
Int J Neural Syst. 1997 Oct-Dec;8(5-6):581-99. doi: 10.1142/s0129065797000537.
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Using subsite coupling to predict signal peptides.利用亚位点偶联预测信号肽。
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7
Signal peptide discrimination and cleavage site identification using SVM and NN.使用 SVM 和 NN 进行信号肽识别和切割位点鉴定。
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8
Signal peptidases in protein biosynthesis and intracellular transport.蛋白质生物合成和细胞内运输中的信号肽酶。
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本文引用的文献

1
Patterns of amino acids near signal-sequence cleavage sites.信号序列切割位点附近的氨基酸模式。
Eur J Biochem. 1983 Jun 1;133(1):17-21. doi: 10.1111/j.1432-1033.1983.tb07424.x.
2
How signal sequences maintain cleavage specificity.信号序列如何维持切割特异性。
J Mol Biol. 1984 Feb 25;173(2):243-51. doi: 10.1016/0022-2836(84)90192-x.
3
Computer methods to locate signals in nucleic acid sequences.在核酸序列中定位信号的计算机方法。
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 2):505-19. doi: 10.1093/nar/12.1part2.505.
4
A putative signal peptidase recognition site and sequence in eukaryotic and prokaryotic signal peptides.真核生物和原核生物信号肽中一个假定的信号肽酶识别位点及序列。
J Mol Biol. 1983 Jun 25;167(2):391-409. doi: 10.1016/s0022-2836(83)80341-6.
5
Signal sequences. The limits of variation.信号序列。变异的限度。
J Mol Biol. 1985 Jul 5;184(1):99-105. doi: 10.1016/0022-2836(85)90046-4.
6
Conserved residues of the leader peptide are essential for cleavage by leader peptidase.前导肽的保守残基对于前导肽酶的切割至关重要。
J Biol Chem. 1985 Dec 15;260(29):15914-8.
7
Sequence determinants of cytosolic N-terminal protein processing.胞质N端蛋白质加工的序列决定因素。
Eur J Biochem. 1986 Jan 2;154(1):193-6. doi: 10.1111/j.1432-1033.1986.tb09378.x.
8
On the predictive recognition of signal peptide sequences.关于信号肽序列的预测识别。
Virus Res. 1985 Oct;3(3):271-86. doi: 10.1016/0168-1702(85)90051-6.
9
The independent distribution of amino acid near neighbor pairs into polypeptides.氨基酸近邻对在多肽中的独立分布。
Biochem Biophys Res Commun. 1977 Oct 10;78(3):1018-24. doi: 10.1016/0006-291x(77)90523-x.