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机器学习模型在预后和预测性癌症生物标志物识别中的应用:系统评价。

Machine Learning Models for the Identification of Prognostic and Predictive Cancer Biomarkers: A Systematic Review.

机构信息

Department of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

Centre for Artificial Intelligence Research and Optimization, Torrens University Australia, Fortitude Valley, Brisbane, QLD 4006, Australia.

出版信息

Int J Mol Sci. 2023 Apr 24;24(9):7781. doi: 10.3390/ijms24097781.

DOI:10.3390/ijms24097781
PMID:37175487
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10178491/
Abstract

The identification of biomarkers plays a crucial role in personalized medicine, both in the clinical and research settings. However, the contrast between predictive and prognostic biomarkers can be challenging due to the overlap between the two. A prognostic biomarker predicts the future outcome of cancer, regardless of treatment, and a predictive biomarker predicts the effectiveness of a therapeutic intervention. Misclassifying a prognostic biomarker as predictive (or vice versa) can have serious financial and personal consequences for patients. To address this issue, various statistical and machine learning approaches have been developed. The aim of this study is to present an in-depth analysis of recent advancements, trends, challenges, and future prospects in biomarker identification. A systematic search was conducted using PubMed to identify relevant studies published between 2017 and 2023. The selected studies were analyzed to better understand the concept of biomarker identification, evaluate machine learning methods, assess the level of research activity, and highlight the application of these methods in cancer research and treatment. Furthermore, existing obstacles and concerns are discussed to identify prospective research areas. We believe that this review will serve as a valuable resource for researchers, providing insights into the methods and approaches used in biomarker discovery and identifying future research opportunities.

摘要

生物标志物的鉴定在个性化医疗中起着至关重要的作用,无论是在临床还是研究环境中。然而,由于两者之间存在重叠,预测性和预后性生物标志物之间的区别可能具有挑战性。预后性生物标志物预测癌症的未来结果,无论是否进行治疗,而预测性生物标志物预测治疗干预的效果。将预后性生物标志物错误地归类为预测性(反之亦然)可能会给患者带来严重的财务和个人后果。为了解决这个问题,已经开发了各种统计和机器学习方法。本研究旨在对生物标志物鉴定的最新进展、趋势、挑战和未来前景进行深入分析。使用 PubMed 进行了系统搜索,以确定 2017 年至 2023 年期间发表的相关研究。对选定的研究进行了分析,以更好地理解生物标志物鉴定的概念,评估机器学习方法,评估研究活动的水平,并强调这些方法在癌症研究和治疗中的应用。此外,还讨论了现有的障碍和关注点,以确定未来的研究领域。我们相信,这篇综述将为研究人员提供有价值的资源,深入了解生物标志物发现中使用的方法和方法,并确定未来的研究机会。

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