Institute for Molecular Biosciences, Goethe University, Max-von-Laue-Str. 9, D-60438 Frankfurt, Germany.
Genes (Basel). 2023 Jul 13;14(7):1437. doi: 10.3390/genes14071437.
is the fastest-growing bacterium, with a doubling time of approximately 12-14 min. It has a high potential for basic research and biotechnological applications, e.g., it can be used for the cell-free production of (labeled) heterologous proteins, for synthetic biological applications, and for the production of various compounds. However, the ploidy level in remains unknown. At nine time points throughout the growth curve, we analyzed the numbers of origins and termini of both chromosomes with qPCR and the relative abundances of all genomic sites with marker frequency analyses. During the lag phase until early exponential growth, the origin copy number and origin/terminus ratio of chromosome 1 increased severalfold, but the increase was lower for chromosome 2. This increase was paralleled by an increase in cell volume. During the exponential phase, the origin/terminus ratio and cell volume decreased again. This highly dynamic and fast regulation has not yet been described for any other species. In this study, the gene dosage increase in origin-adjacent genes during the lag phase is discussed together with the nonrandom distribution of genes on the chromosomes of . Taken together, the results of this study provide the first comprehensive overview of the chromosome dynamics in and will guide the optimization of molecular biological characterization and biotechnological applications.
是增长最快的细菌,倍增时间约为 12-14 分钟。它具有很高的基础研究和生物技术应用潜力,例如,它可用于无细胞生产(标记)异源蛋白、用于合成生物学应用以及用于生产各种化合物。然而, 的倍性水平尚不清楚。在生长曲线的九个时间点,我们使用 qPCR 分析了两条染色体的起始点和终止点的数量,并用标记频率分析了所有基因组位点的相对丰度。在滞后期到早期指数增长期,染色体 1 的起始点拷贝数和起始/终止比增加了几倍,但染色体 2 的增加较低。这种增加与细胞体积的增加平行。在指数期,起始/终止比和细胞体积再次下降。这种高度动态和快速的调节尚未在任何其他物种中描述过。在这项研究中,讨论了滞后期邻近起始点基因的基因剂量增加,以及 染色体上基因的非随机分布。总之,本研究首次全面概述了 中的染色体动态,并将指导分子生物学表征和生物技术应用的优化。