• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人皮肤杆菌属,新属,新种,伊米亚科的一个新成员,揭示了皮肤衍生代谢物的潜在利用价值。

Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites.

作者信息

Jo HyungWoo, Baek Chaeyun, Heo Young Mok, Kim Hye-Been, Lee Haeun, Kang Seunghyun, Mun Seyoung, Oh Yunseok, Ko Doyeong, Han Kyudong, Riesco Raúl, Trujillo Martha E, Lee Dong-Geol

机构信息

COSMAX BTI, R&I Center, Seongnam, 13486, Republic of Korea.

Department of Microbiology, Dankook University, Cheonan, 31116, Republic of Korea.

出版信息

Antonie Van Leeuwenhoek. 2023 Nov;116(11):1139-1150. doi: 10.1007/s10482-023-01873-6. Epub 2023 Sep 2.

DOI:10.1007/s10482-023-01873-6
PMID:37658955
Abstract

A non-motile, novel actinobacterial strain, Kera-3, which is a gram-positive, aerobic, rod-shaped bacterium, was isolated from human keratinocytes on 1/10 diluted R2A agar. Whole-cell hydrolysis of amino acids revealed the presence of meso-DAP, alanine, and glutamic acid. The predominant menaquinone was MK-9 (H8), whereas the primary fatty acids were C and C ω9c. The major phospholipids included diphosphatidylglycerol and aminophospholipids, along with an unidentified phosphoglycolipid and an aminophosphoglycolipid. The G+C content of the genomic DNA was 73.2%, based on the complete genome sequence. Phylogenetic analyses of the 16S rRNA gene sequence and phylogenomic analysis of 91 core genes showed that strain Kera-3 formed a new lineage in the family Iamiaceae, with the closest neighbour Rhabdothermincola sediminis SYSU G02662 having 91.19% 16S rRNA gene sequence identity. A comparative genomic study of the predicted general metabolism and carbohydrate-active enzymes supported the phylogenetic and phylogenomic data. Based on the analysis of physiological, biochemical, and genomic characteristics, strain Kera-3 can be distinguished from known genera in the family Iamiaceae and represents a novel genus and species. Therefore, the name Dermatobacter hominis gen. nov., sp. nov. was proposed, with the type strain Kera-3 (= KACC 22415 = LMG 32493).

摘要

从1/10稀释的R2A琼脂上的人角质形成细胞中分离出一种非运动性的新型放线菌菌株Kera-3,它是革兰氏阳性、需氧、杆状细菌。氨基酸的全细胞水解显示存在内消旋二氨基庚二酸、丙氨酸和谷氨酸。主要的甲基萘醌是MK-9(H8),而主要脂肪酸是C和C ω9c。主要的磷脂包括二磷脂酰甘油和氨基磷脂,以及一种未鉴定的磷酸糖脂和一种氨基磷酸糖脂。基于完整基因组序列,基因组DNA的G+C含量为73.2%。16S rRNA基因序列的系统发育分析和91个核心基因的系统基因组分析表明,菌株Kera-3在艾米亚科中形成了一个新的谱系,其最接近的邻居Sediminis嗜热放线菌SYSU G02662的16S rRNA基因序列同一性为91.19%。对预测的一般代谢和碳水化合物活性酶的比较基因组研究支持了系统发育和系统基因组数据。基于生理、生化和基因组特征分析,菌株Kera-3可与艾米亚科中的已知属区分开来,代表一个新的属和种。因此,提出了人皮肤杆菌属(Dermatobacter hominis)新属新种,模式菌株为Kera-3(=KACC 22415=LMG 32493)。

相似文献

1
Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites.人皮肤杆菌属,新属,新种,伊米亚科的一个新成员,揭示了皮肤衍生代谢物的潜在利用价值。
Antonie Van Leeuwenhoek. 2023 Nov;116(11):1139-1150. doi: 10.1007/s10482-023-01873-6. Epub 2023 Sep 2.
2
gen. nov., sp. nov., a new actinobacterium isolated from hot spring sediment, and emended description of the family .新属、新种,一种从温泉沉积物中分离出的新型放线菌,以及该科的修订描述。
Int J Syst Evol Microbiol. 2019 Jun;71(3). doi: 10.1099/ijsem.0.004760. Epub 2021 Mar 19.
3
gen. nov. sp. nov., a new marine actinobacterium of the family , isolated from South China Sea sediment environments.gen. nov. sp. nov., 一种新型海洋放线菌科菌,分离自南海沉积物环境。
Int J Syst Evol Microbiol. 2020 Jun;70(6):3852-3858. doi: 10.1099/ijsem.0.004251. Epub 2020 Jun 5.
4
sp. nov., a novel actinobacterium isolated from a saline lake sediment.sp. nov.,一种从盐湖沉积物中分离得到的新型放线菌。
Int J Syst Evol Microbiol. 2022 May;72(5). doi: 10.1099/ijsem.0.005361.
5
Desertimonas flava gen. nov., sp. nov. isolated from a desert soil, and proposal of Ilumatobacteraceae fam. nov.从沙漠土壤中分离出的黄色沙漠单胞菌属,新属,新种,以及新科——发光杆菌科的提议
Int J Syst Evol Microbiol. 2018 Nov;68(11):3593-3599. doi: 10.1099/ijsem.0.003038. Epub 2018 Oct 4.
6
Epidermidibacterium keratini gen. nov., sp. nov., a member of the family Sporichthyaceae, isolated from keratin epidermis.表皮角质杆菌属,新属,新种,属于芽孢杆菌科,从角质化表皮中分离得到。
Int J Syst Evol Microbiol. 2018 Mar;68(3):745-750. doi: 10.1099/ijsem.0.002579. Epub 2018 Jan 23.
7
gen. nov., sp. nov. and gen. nov., sp. nov., two acidobacteria isolated from forest soil, and reclassification of and as gen. nov., comb. nov. and comb. nov.新属、新种以及新属、新种,从森林土壤中分离出的两种酸杆菌,以及将……重新分类为新属、新组合和新组合。
Int J Syst Evol Microbiol. 2022 Jun;72(6). doi: 10.1099/ijsem.0.005415.
8
gen. nov., sp. nov., isolated from a Kuwait tidal flat.属名. 新种,种名. 新,从科威特潮滩中分离得到。
Int J Syst Evol Microbiol. 2021 Apr;71(4). doi: 10.1099/ijsem.0.004792.
9
gen. nov., sp. nov., a new member of the family isolated from leaf tissues of oil palm ( Jacq.).属名新创,种名新创,是从油棕(Jacq.)叶片组织中分离得到的一个新成员,隶属于某科。
Int J Syst Evol Microbiol. 2020 Apr;70(4):2640-2647. doi: 10.1099/ijsem.0.004084. Epub 2020 Mar 23.
10
gen. nov., sp. nov., isolated from oyster, and description of fam. nov.属名. 新种. ,模式种. ,从牡蛎中分离得到,描述新科.
Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004855.

引用本文的文献

1
Genomic characterisation of Actinospongicola halichondriae gen. nov., sp. nov., the first sponge-derived cultivated representative of a new genus within the class Acidimicrobiia.哈氏海绵嗜放线菌新属新种的基因组特征分析,该菌是嗜酸微菌纲中一个新属的首个源自海绵的可培养代表菌株。
Antonie Van Leeuwenhoek. 2025 Jul 15;118(8):113. doi: 10.1007/s10482-025-02126-4.

本文引用的文献

1
antiSMASH 6.0: improving cluster detection and comparison capabilities.antiSMASH 6.0:提高簇检测和比较能力。
Nucleic Acids Res. 2021 Jul 2;49(W1):W29-W35. doi: 10.1093/nar/gkab335.
2
MEGA11: Molecular Evolutionary Genetics Analysis Version 11.MEGA11:分子进化遗传学分析版本 11。
Mol Biol Evol. 2021 Jun 25;38(7):3022-3027. doi: 10.1093/molbev/msab120.
3
Activation of mitochondrial TUFM ameliorates metabolic dysregulation through coordinating autophagy induction.线粒体 TUFM 的激活通过协调自噬诱导改善代谢失调。
Commun Biol. 2021 Jan 4;4(1):1. doi: 10.1038/s42003-020-01566-0.
4
gen. nov. sp. nov., a new marine actinobacterium of the family , isolated from South China Sea sediment environments.gen. nov. sp. nov., 一种新型海洋放线菌科菌,分离自南海沉积物环境。
Int J Syst Evol Microbiol. 2020 Jun;70(6):3852-3858. doi: 10.1099/ijsem.0.004251. Epub 2020 Jun 5.
5
dbCAN-seq: a database of carbohydrate-active enzyme (CAZyme) sequence and annotation.dbCAN-seq:碳水化合物活性酶(CAZyme)序列和注释数据库。
Nucleic Acids Res. 2018 Jan 4;46(D1):D516-D521. doi: 10.1093/nar/gkx894.
6
KBase: The United States Department of Energy Systems Biology Knowledgebase.KBase:美国能源部系统生物学知识库。
Nat Biotechnol. 2018 Jul 6;36(7):566-569. doi: 10.1038/nbt.4163.
7
VSEARCH: a versatile open source tool for metagenomics.VSEARCH:一款用于宏基因组学的多功能开源工具。
PeerJ. 2016 Oct 18;4:e2584. doi: 10.7717/peerj.2584. eCollection 2016.
8
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
9
Complex heatmaps reveal patterns and correlations in multidimensional genomic data.复杂热图揭示多维基因组数据中的模式和相关性。
Bioinformatics. 2016 Sep 15;32(18):2847-9. doi: 10.1093/bioinformatics/btw313. Epub 2016 May 20.
10
Evolutionary relationships of completely sequenced Clostridia species and close relatives.已完成全基因组测序的梭菌属物种及其近缘物种的进化关系。
Int J Syst Evol Microbiol. 2015 Nov;65(11):4276-4283. doi: 10.1099/ijsem.0.000638. Epub 2015 Sep 25.