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DASS Good:空间队列数据的可解释数据挖掘

DASS Good: Explainable Data Mining of Spatial Cohort Data.

作者信息

Wentzel A, Floricel C, Canahuate G, Naser M A, Mohamed A S, Fuller C D, van Dijk L, Marai G E

机构信息

University of Illinois Chicago, Electronic Visualization Lab.

University of Iowa.

出版信息

Comput Graph Forum. 2023 Jun;42(3):283-295. doi: 10.1111/cgf.14830. Epub 2023 Jun 27.

DOI:10.1111/cgf.14830
PMID:37854026
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10583718/
Abstract

Developing applicable clinical machine learning models is a difficult task when the data includes spatial information, for example, radiation dose distributions across adjacent organs at risk. We describe the co-design of a modeling system, DASS, to support the hybrid human-machine development and validation of predictive models for estimating long-term toxicities related to radiotherapy doses in head and neck cancer patients. Developed in collaboration with domain experts in oncology and data mining, DASS incorporates human-in-the-loop visual steering, spatial data, and explainable AI to augment domain knowledge with automatic data mining. We demonstrate DASS with the development of two practical clinical stratification models and report feedback from domain experts. Finally, we describe the design lessons learned from this collaborative experience.

摘要

当数据包含空间信息时,例如头颈部癌患者相邻危及器官的辐射剂量分布,开发适用的临床机器学习模型是一项艰巨的任务。我们描述了一个建模系统DASS的协同设计,以支持混合人机开发和验证用于估计头颈部癌患者放疗剂量相关长期毒性的预测模型。DASS是与肿瘤学和数据挖掘领域的专家合作开发的,它结合了人在回路视觉引导、空间数据和可解释人工智能,通过自动数据挖掘来增强领域知识。我们通过开发两个实用的临床分层模型展示了DASS,并报告了领域专家的反馈。最后,我们描述了从这次合作经验中学到的设计经验教训。

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本文引用的文献

1
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IEEE Vis Conf. 2020 Oct;2020:281-285. doi: 10.1109/vis47514.2020.00063.
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Extending the Nested Model for User-Centric XAI: A Design Study on GNN-based Drug Repurposing.扩展以用户为中心的可解释人工智能的嵌套模型:基于图神经网络的药物重定位设计研究
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Visinity: Visual Spatial Neighborhood Analysis for Multiplexed Tissue Imaging Data.
玫瑰有刺:通过可视化分析和序列规则挖掘了解肿瘤学护理提供的弊端。
IEEE Trans Vis Comput Graph. 2024 Jan;30(1):1227-1237. doi: 10.1109/TVCG.2023.3326939. Epub 2023 Dec 25.
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Multi-organ spatial stratification of 3-D dose distributions improves risk prediction of long-term self-reported severe symptoms in oropharyngeal cancer patients receiving radiotherapy: development of a pre-treatment decision support tool.三维剂量分布的多器官空间分层改善了接受放疗的口咽癌患者长期自我报告的严重症状的风险预测:一种治疗前决策支持工具的开发。
Front Oncol. 2023 Aug 8;13:1210087. doi: 10.3389/fonc.2023.1210087. eCollection 2023.
毗邻性分析:用于多重组织成像数据的可视化空间邻域分析。
IEEE Trans Vis Comput Graph. 2023 Jan;29(1):106-116. doi: 10.1109/TVCG.2022.3209378. Epub 2022 Dec 16.
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A Tale of Two Centers: Visual Exploration of Health Disparities in Cancer Care.两个中心的故事:癌症护理中健康差异的可视化探索
IEEE Pac Vis Symp. 2022 Apr;2022:101-110. doi: 10.1109/pacificvis53943.2022.00019. Epub 2022 Jun 8.
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Crossing the chasm from model performance to clinical impact: the need to improve implementation and evaluation of AI.跨越从模型性能到临床影响的鸿沟:改进人工智能实施与评估的必要性。
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