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热泉古菌中电子分支 flavoenzyme EtfABCX 的膜相关特性研究

Characterization of the Membrane-Associated Electron-Bifurcating Flavoenzyme EtfABCX from the Hyperthermophilic Bacterium .

机构信息

Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia 30602, United States.

Department of Biochemistry, University of California, Riverside, Riverside, California 92507, United States.

出版信息

Biochemistry. 2023 Dec 19;62(24):3554-3567. doi: 10.1021/acs.biochem.3c00473. Epub 2023 Dec 7.

DOI:10.1021/acs.biochem.3c00473
PMID:38061393
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10734219/
Abstract

Electron bifurcation is an energy-conservation mechanism in which a single enzyme couples an exergonic reaction with an endergonic one. Heterotetrameric EtfABCX drives the reduction of low-potential ferredoxin (°' ∼ -450 mV) by oxidation of the midpotential NADH (°' = -320 mV) by simultaneously coupling the reaction to reduction of the high-potential menaquinone (°' = -74 mV). Electron bifurcation occurs at the NADH-oxidizing bifurcating-flavin adenine dinucleotide (BF-FAD) in EtfA, which has extremely crossed half-potentials and passes the first, high-potential electron to an electron-transferring FAD and via two iron-sulfur clusters eventually to menaquinone. The low-potential electron on the BF-FAD semiquinone simultaneously reduces ferredoxin. We have expressed the genes encodingEtfABCX in and purified the EtfABCX holoenzyme and the EtfAB subcomplex. The bifurcation activity of EtfABCX was demonstrated by using electron paramagnetic resonance (EPR) to follow accumulation of reduced ferredoxin. To elucidate structural factors that impart the bifurcating ability, EPR and NADH titrations monitored by visible spectroscopy and dye-linked enzyme assays have been employed to characterize four conserved residues, R38, P239, and V242 in EtfA and R140 in EtfB, in the immediate vicinity of the BF-FAD. The R38, P239, and V242 variants showed diminished but still significant bifurcation activity. Despite still being partially reduced by NADH, the R140 variant had no bifurcation activity, and electron transfer to its two [4Fe-4S] clusters was prevented. The role of R140 is discussed in terms of the bifurcation mechanism in EtfABCX and in the other three families of bifurcating enzymes.

摘要

电子分支是一种能量守恒机制,其中单个酶将放能反应与吸能反应偶联。异源四聚体 EtfABCX 通过同时将反应偶联到高电位menaquinone(°'=-74 mV)的还原,驱动低电位ferredoxin(°'~-450 mV)的还原,该反应由中电位 NADH(°'=-320 mV)的氧化驱动。电子分支发生在 EtfA 中的 NADH 氧化分支黄素腺嘌呤二核苷酸(BF-FAD)上,其具有极其交叉的半电位,并将第一个高电位电子传递给电子转移 FAD,并通过两个铁硫簇最终传递给menaquinone。BF-FAD 半醌上的低电位电子同时还原ferredoxin。我们已经在大肠杆菌中表达了编码 EtfABCX 的基因,并纯化了 EtfABCX 全酶和 EtfAB 亚复合物。通过电子顺磁共振(EPR)来跟踪还原的ferredoxin 的积累,证明了 EtfABCX 的分支活性。为了阐明赋予分支能力的结构因素,已经采用 EPR 和 NADH 滴定法结合可见光谱和染料连接酶测定法来表征 EtfA 中四个保守残基 R38、P239 和 V242 以及 EtfB 中 R140 附近的 BF-FAD。R38、P239 和 V242 变体显示出降低但仍然显著的分支活性。尽管 R140 变体仍部分被 NADH 还原,但它没有分支活性,并且阻止了其两个[4Fe-4S]簇的电子转移。R140 的作用根据 EtfABCX 中的分支机制以及其他三种分支酶家族进行了讨论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/5a519cffb92a/bi3c00473_0007.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/843ab41322a1/bi3c00473_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/5a519cffb92a/bi3c00473_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/4a6bd30e138e/bi3c00473_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/48f8cec02607/bi3c00473_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/63a24e6a9b66/bi3c00473_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/fef19c8d1ea2/bi3c00473_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/c2e81dd9d414/bi3c00473_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/843ab41322a1/bi3c00473_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07cf/10734219/5a519cffb92a/bi3c00473_0007.jpg

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