Laboratoire de Bioénergétique et Ingénierie des Protéines. CNRS, Aix Marseille Université, UMR, 7281 Marseille, France.
Molecular Biomimetics, Department of Chemistry, Ångström Laboratory, Uppsala University, 75120 Uppsala, Sweden.
J Am Chem Soc. 2024 Jan 17;146(2):1455-1466. doi: 10.1021/jacs.3c10693. Epub 2024 Jan 2.
The enzyme FeFe-hydrogenase catalyzes H evolution and oxidation at an active site that consists of a [4Fe-4S] cluster bridged to a [Fe(CO)(CN)(azadithiolate)] subsite. Previous investigations of its mechanism were mostly conducted on a few "prototypical" FeFe-hydrogenases, such as that from (Cr HydA1), but atypical hydrogenases have recently been characterized in an effort to explore the diversity of this class of enzymes. We aim at understanding why prototypical hydrogenases are active in either direction of the reaction in response to a small deviation from equilibrium, whereas the homologous enzyme from (Tam HydS) shows activity only under conditions of very high driving force, a behavior that was referred to as "irreversible catalysis". We follow up on previous spectroscopic studies and recent developments in the kinetic modeling of bidirectional reactions to investigate and compare the catalytic cycles of Cr HydA1 and Tam HydS under conditions of direct electron transfer with an electrode. We compare the hypothetical catalytic cycles described in the literature, and we show that the observed changes in catalytic activity as a function of potential, pH, and H concentration can be explained with the assumption that the same catalytic mechanism applies. This helps us identify which variations in properties of the catalytic intermediates give rise to the distinct "reversible" or "irreversible" catalytic behaviors.
酶 FeFe-氢化酶在一个由[4Fe-4S]簇桥接到[Fe(CO)(CN)(氮杂二硫代)配体]亚位点组成的活性位点上催化 H 的产生和氧化。其机制的先前研究主要在几种“典型”的 FeFe-氢化酶上进行,例如(CrHydA1),但最近已经对非典型氢化酶进行了表征,以探索这类酶的多样性。我们旨在理解为什么典型的氢化酶在反应的任一方向上都是活性的,而来自(TamHydS)的同源酶仅在非常高的驱动力条件下显示活性,这种行为被称为“不可逆催化”。我们在以前的光谱研究的基础上,并根据双向反应的动力学模型的最新进展,研究和比较 CrHydA1 和 TamHydS 在与电极直接电子转移条件下的催化循环。我们比较了文献中描述的假设催化循环,并表明可以用相同的催化机制来解释作为电势、pH 和 H 浓度函数的催化活性的观察到的变化。这有助于我们确定催化中间体的哪些性质变化导致了不同的“可逆”或“不可逆”催化行为。