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CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM：评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
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QUAST: quality assessment tool for genome assemblies.QUAST：基因组组装质量评估工具。
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从菲律宾当地发酵的米虾混合物中分离出的BS25的基因组序列草图。

Draft genome sequence of BS25 isolated from a local fermented rice-shrimp mixture from the Philippines.

作者信息

Lara Zachary B, Amoranto Mia Beatriz C, Elegado Francisco B, Dalmacio Leslie Michelle M, Balolong Marilen P

机构信息

Department of Biochemistry and Molecular Biology, College of Medicine, University of the Philippines, Manila, Philippines.

National Institute of Molecular Biology and Biotechnology, University of the Philippines, Los Baños, Philippines.

出版信息

Microbiol Resour Announc. 2024 Feb 15;13(2):e0080823. doi: 10.1128/mra.00808-23. Epub 2024 Jan 5.

DOI:10.1128/mra.00808-23
PMID:38179907
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10868257/
Abstract

The draft genome sequence of BS25, previously isolated from a fermented rice-shrimp mixture () in the Philippines, was analyzed. The genome contains 3,264,139 bp (44.62% GC%), and a total of 3,069 predicted coding sequences, 2 rRNAs, and 52 tRNAs.

摘要

对之前从菲律宾的发酵虾稻混合物中分离出的BS25的基因组序列草图进行了分析。该基因组包含3,264,139个碱基对（GC含量为44.62%），总共预测有3,069个编码序列、2个rRNA和52个tRNA。