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DNA 作为通用的化学计算和数据存储基质。

DNA as a universal chemical substrate for computing and data storage.

机构信息

State Key Laboratory of Metal Matrix Composites, School of Materials Science and Engineering, Shanghai Jiao Tong University, Shanghai, China.

Zhangjiang Institute for Advanced Study (ZIAS), Shanghai Jiao Tong University, Shanghai, China.

出版信息

Nat Rev Chem. 2024 Mar;8(3):179-194. doi: 10.1038/s41570-024-00576-4. Epub 2024 Feb 9.

DOI:10.1038/s41570-024-00576-4
PMID:38337008
Abstract

DNA computing and DNA data storage are emerging fields that are unlocking new possibilities in information technology and diagnostics. These approaches use DNA molecules as a computing substrate or a storage medium, offering nanoscale compactness and operation in unconventional media (including aqueous solutions, water-in-oil microemulsions and self-assembled membranized compartments) for applications beyond traditional silicon-based computing systems. To build a functional DNA computer that can process and store molecular information necessitates the continued development of strategies for computing and data storage, as well as bridging the gap between these fields. In this Review, we explore how DNA can be leveraged in the context of DNA computing with a focus on neural networks and compartmentalized DNA circuits. We also discuss emerging approaches to the storage of data in DNA and associated topics such as the writing, reading, retrieval and post-synthesis editing of DNA-encoded data. Finally, we provide insights into how DNA computing can be integrated with DNA data storage and explore the use of DNA for near-memory computing for future information technology and health analysis applications.

摘要

DNA 计算和 DNA 数据存储是新兴领域,它们为信息技术和诊断学领域带来了新的可能。这些方法将 DNA 分子用作计算基质或存储介质,在包括水相溶液、油包水微乳液和自组装膜化隔室等非常规介质中提供纳米级紧凑性和操作,适用于超越传统硅基计算系统的应用。为了构建能够处理和存储分子信息的功能性 DNA 计算机,需要不断开发计算和数据存储策略,并弥合这些领域之间的差距。在这篇综述中,我们探讨了 DNA 如何在 DNA 计算的背景下得到利用,重点是神经网络和分隔 DNA 电路。我们还讨论了 DNA 数据存储的新兴方法以及与 DNA 编码数据的写入、读取、检索和合成后编辑相关的主题。最后,我们深入探讨了 DNA 计算如何与 DNA 数据存储相结合,并探索了 DNA 在未来信息技术和健康分析应用中近存计算的应用。

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J Am Chem Soc. 2023 Nov 22;145(46):25033-25042. doi: 10.1021/jacs.3c04142. Epub 2023 Oct 21.
2
Digital data storage on DNA tape using CRISPR base editors.基于 CRISPR 碱基编辑器的 DNA 带数字数据存储。
Nat Commun. 2023 Oct 13;14(1):6472. doi: 10.1038/s41467-023-42223-4.
3
DNA-based programmable gate arrays for general-purpose DNA computing.基于 DNA 的可编程门阵列,用于通用 DNA 计算。
用于高容量DNA数据存储的光子微球:通过不褪色索引实现强大、直接且可扩展的随机访问。
Sci Adv. 2025 Jun 20;11(25):eadw2613. doi: 10.1126/sciadv.adw2613. Epub 2025 Jun 18.
4
Gold Nanoparticle-DNA Conjugates: An Enzymatic DNA Synthesis Platform.金纳米颗粒 - DNA 缀合物:一个酶促 DNA 合成平台。
ACS Omega. 2025 May 14;10(20):20452-20464. doi: 10.1021/acsomega.5c00645. eCollection 2025 May 27.
5
Exploring potential biosafety implications in DNA information storage.探索DNA信息存储中潜在的生物安全影响。
Biosaf Health. 2025 Mar 27;7(2):132-139. doi: 10.1016/j.bsheal.2025.03.006. eCollection 2025 Apr.
6
A Programmed DNA Dynamic Assembly-Guided Molecular Amplifier for Authentic Information Decryption.一种用于真实信息解密的程序化DNA动态组装引导分子放大器。
Adv Sci (Weinh). 2025 Jun;12(22):e2409586. doi: 10.1002/advs.202409586. Epub 2025 May 19.
7
Implementing complex nucleic acid circuits in living cells.在活细胞中实现复杂核酸电路
Sci Adv. 2025 May 2;11(18):eadv6512. doi: 10.1126/sciadv.adv6512. Epub 2025 Apr 30.
8
Towards next-generation DNA encryption via an expanded genetic system.通过扩展遗传系统实现下一代DNA加密
Natl Sci Rev. 2024 Dec 23;12(4):nwae469. doi: 10.1093/nsr/nwae469. eCollection 2025 Apr.
9
Super-multiplexed imaging and coding in the range of radio frequency.射频范围内的超复用成像与编码
Nat Commun. 2025 Mar 15;16(1):2567. doi: 10.1038/s41467-025-57785-8.
10
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J Am Chem Soc. 2025 Feb 19;147(7):5755-5763. doi: 10.1021/jacs.4c13854. Epub 2025 Feb 5.
Nature. 2023 Oct;622(7982):292-300. doi: 10.1038/s41586-023-06484-9. Epub 2023 Sep 13.
4
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Proc Natl Acad Sci U S A. 2023 Sep 12;120(37):e2217330120. doi: 10.1073/pnas.2217330120. Epub 2023 Sep 5.
5
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Nat Nanotechnol. 2023 Aug;18(8):912-921. doi: 10.1038/s41565-023-01377-4. Epub 2023 May 4.
6
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Nat Rev Chem. 2021 Apr;5(4):225-239. doi: 10.1038/s41570-021-00251-y. Epub 2021 Feb 10.
7
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Nat Commun. 2023 Apr 20;14(1):2257. doi: 10.1038/s41467-023-37752-x.
8
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Nanoscale. 2023 May 4;15(17):7676-7694. doi: 10.1039/d2nr06202j.
9
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Nat Nanotechnol. 2023 Jun;18(6):677-686. doi: 10.1038/s41565-023-01348-9. Epub 2023 Mar 27.
10
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Lab Chip. 2023 Apr 12;23(8):1981-2004. doi: 10.1039/d2lc00972b.