Reihanisaransari Reza, Gajjela Chalapathi Charan, Wu Xinyu, Ishrak Ragib, Corvigno Sara, Zhong Yanping, Liui Jinsong, Sood Anil K, Mayerich David, Berisha Sebastian, Reddy Rohith
Department of Electrical and Computer Engineering, University of Houston, Houston, TX.
The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
ArXiv. 2024 Feb 28:arXiv:2402.17960v1.
Ovarian cancer detection has traditionally relied on a multi-step process that includes biopsy, tissue staining, and morphological analysis by experienced pathologists. While widely practiced, this conventional approach suffers from several drawbacks: it is qualitative, time-intensive, and heavily dependent on the quality of staining. Mid-infrared (MIR) hyperspectral photothermal imaging is a label-free, biochemically quantitative technology that, when combined with machine learning algorithms, can eliminate the need for staining and provide quantitative results comparable to traditional histology. However, this technology is slow. This work presents a novel approach to MIR photothermal imaging that enhances its speed by an order of magnitude. Our method significantly accelerates data collection by capturing a combination of highresolution and interleaved, lower-resolution infrared band images and applying computational techniques for data interpolation. We effectively minimize data collection requirements by leveraging sparse data acquisition and employing curvelet-based reconstruction algorithms. This approach enhances imaging speed without compromising image quality and ensures robust tissue segmentation. This method resolves the longstanding trade-off between imaging resolution and data collection speed, enabling the reconstruction of high-quality, high-resolution images from undersampled datasets and achieving a 10X improvement in data acquisition time. We assessed the performance of our sparse imaging methodology using a variety of quantitative metrics, including mean squared error (MSE), structural similarity index (SSIM), and tissue subtype classification accuracies, employing both random forest and convolutional neural network (CNN) models, accompanied by Receiver Operating Characteristic (ROC) curves. Our statistically robust analysis, based on data from 100 ovarian cancer patient samples and over 65 million data points, demonstrates the method's capability to produce superior image quality and accurately distinguish between different gynecological tissue types with segmentation accuracy exceeding 95%. Our work demonstrates the feasibility of integrating rapid MIR hyperspectral photothermal imaging with machine learning in enhancing ovarian cancer tissue characterization, paving the way for quantitative, label-free, automated histopathology. It represents a significant leap forward from traditional histopathological methods, offering profound implications for cancer diagnostics and treatment decision-making.
卵巢癌检测传统上依赖于一个多步骤过程,包括活检、组织染色以及由经验丰富的病理学家进行形态学分析。尽管这种传统方法被广泛应用,但它存在几个缺点:它是定性的、耗时的,并且严重依赖于染色质量。中红外(MIR)高光谱光热成像是一种无标记的生物化学定量技术,当与机器学习算法相结合时,可以消除染色的需要,并提供与传统组织学相当的定量结果。然而,这项技术速度较慢。这项工作提出了一种新的MIR光热成像方法,将其速度提高了一个数量级。我们的方法通过捕获高分辨率和交错的低分辨率红外波段图像的组合,并应用数据插值的计算技术,显著加快了数据收集速度。我们通过利用稀疏数据采集和采用基于曲波的重建算法,有效地减少了数据收集需求。这种方法在不影响图像质量的情况下提高了成像速度,并确保了稳健的组织分割。该方法解决了成像分辨率和数据收集速度之间长期存在的权衡问题,能够从未采样的数据集中重建高质量、高分辨率的图像,并使数据采集时间提高了10倍。我们使用多种定量指标评估了我们的稀疏成像方法的性能,包括均方误差(MSE)、结构相似性指数(SSIM)以及组织亚型分类准确率,采用了随机森林和卷积神经网络(CNN)模型,并伴有接收者操作特征(ROC)曲线。我们基于来自100个卵巢癌患者样本和超过6500万个数据点的数据进行的具有统计学稳健性的分析表明,该方法能够产生卓越的图像质量,并以超过95%的分割准确率准确区分不同的妇科组织类型。我们的工作证明了将快速MIR高光谱光热成像与机器学习相结合以增强卵巢癌组织特征描述的可行性,为定量、无标记、自动化的组织病理学铺平了道路。它代表了从传统组织病理学方法向前迈出的重要一步,对癌症诊断和治疗决策具有深远意义。