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BrainNet:一种用于多模态脑肿瘤分类的融合辅助新型残差块与堆叠自编码器最优框架。

BrainNet: a fusion assisted novel optimal framework of residual blocks and stacked autoencoders for multimodal brain tumor classification.

作者信息

Ullah Muhammad Sami, Khan Muhammad Attique, Almujally Nouf Abdullah, Alhaisoni Majed, Akram Tallha, Shabaz Mohammad

机构信息

Department of Computer Science, HITEC University, Taxila, Pakistan.

Department of Computer Science and Mathematics, Lebanese American University, Beirut, Lebanon.

出版信息

Sci Rep. 2024 Mar 11;14(1):5895. doi: 10.1038/s41598-024-56657-3.

DOI:10.1038/s41598-024-56657-3
PMID:38467755
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10928185/
Abstract

A significant issue in computer-aided diagnosis (CAD) for medical applications is brain tumor classification. Radiologists could reliably detect tumors using machine learning algorithms without extensive surgery. However, a few important challenges arise, such as (i) the selection of the most important deep learning architecture for classification (ii) an expert in the field who can assess the output of deep learning models. These difficulties motivate us to propose an efficient and accurate system based on deep learning and evolutionary optimization for the classification of four types of brain modalities (t1 tumor, t1ce tumor, t2 tumor, and flair tumor) on a large-scale MRI database. Thus, a CNN architecture is modified based on domain knowledge and connected with an evolutionary optimization algorithm to select hyperparameters. In parallel, a Stack Encoder-Decoder network is designed with ten convolutional layers. The features of both models are extracted and optimized using an improved version of Grey Wolf with updated criteria of the Jaya algorithm. The improved version speeds up the learning process and improves the accuracy. Finally, the selected features are fused using a novel parallel pooling approach that is classified using machine learning and neural networks. Two datasets, BraTS2020 and BraTS2021, have been employed for the experimental tasks and obtained an improved average accuracy of 98% and a maximum single-classifier accuracy of 99%. Comparison is also conducted with several classifiers, techniques, and neural nets; the proposed method achieved improved performance.

摘要

医学应用中的计算机辅助诊断(CAD)的一个重要问题是脑肿瘤分类。放射科医生可以使用机器学习算法可靠地检测肿瘤,而无需进行广泛的手术。然而,出现了一些重要挑战,例如:(i)选择用于分类的最重要的深度学习架构;(ii)该领域中能够评估深度学习模型输出的专家。这些困难促使我们提出一种基于深度学习和进化优化的高效准确系统,用于在大规模MRI数据库上对四种类型的脑部模态(t1肿瘤、t1ce肿瘤、t2肿瘤和flair肿瘤)进行分类。因此,基于领域知识修改了一种卷积神经网络(CNN)架构,并将其与一种进化优化算法相连以选择超参数。同时,设计了一个具有十个卷积层的堆叠编码器 - 解码器网络。使用具有Jaya算法更新标准的改进版灰狼算法提取并优化这两个模型的特征。改进版加快了学习过程并提高了准确率。最后,使用一种新颖的并行池化方法融合所选特征,该方法使用机器学习和神经网络进行分类。已将两个数据集BraTS2020和BraTS2021用于实验任务,并获得了98%的改进平均准确率和99%的最大单分类器准确率。还与几个分类器、技术和神经网络进行了比较;所提出的方法取得了更好的性能。

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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8256/10928185/35e6286f0657/41598_2024_56657_Fig9_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8256/10928185/75ba6f00f647/41598_2024_56657_Fig11_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8256/10928185/e78a976466a2/41598_2024_56657_Fig12_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8256/10928185/cf946d143f77/41598_2024_56657_Fig13_HTML.jpg
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