State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China, Key Laboratory of Microbial Resources Collection and Preservation, Ministry of Agriculture and Rural Affairs, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, PR China.
Int J Syst Evol Microbiol. 2024 Jul;74(7). doi: 10.1099/ijsem.0.006473.
A polyphasic taxonomic approach was used to characterize the three bacterial strains (FP830, FP2034, and FP2262) isolated from the rhizosphere soil of rice, corn, and highland barley in Beijing, Heilongjiang, and Tibet, respectively, in PR China. These strains were Gram-negative, rod-shaped, and have one or two polar flagella. They exhibited optimal growth at 28 °C and pH 7.0 in the presence of 1 % (w/v) NaCl and showed fluorescence under ultraviolet light when cultivated on King's B plates. The FP830 genome size is 6.4 Mbp with a G+C content of 61.0 mol%. FP830 has the potential to promote plant growth by producing various metabolites such as fengycin, pyoverdin, indole-3-acetic acid, and the volatile substance 2,3-butanediol. Phylogenetic analysis indicated that three isolates formed an independent branch, which most closely related to type strains DSM 13194 and SWRI12. The values of average nucleotide identity and digital DNA-DNA hybridization between three isolates and closest relatives were not higher than 93.7 and 52.3 %, respectively. The dominant cellular fatty acids were C, summed feature 3 (C 7/C ω6), and summed feature 8 (Cω7/Cω6). The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol, and aminophospholipid. The predominant respiratory quinone was ubiquinone (Q-9). Based on polyphasic taxonomic analysis, it was concluded that strains FP830, FP2034, and FP2262 represented a novel species within the genus , and sp. nov. was proposed for the name of novel species. The type strain is FP830 (=ACCC 62448=JCM 35689).
采用多相分类法对从中国北京、黑龙江和西藏的水稻、玉米和青稞根际土壤中分离得到的三株细菌(FP830、FP2034 和 FP2262)进行了表征。这些菌株为革兰氏阴性、杆状,有一个或两个极鞭毛。它们在 28°C、pH7.0、1%(w/v)NaCl 条件下生长最佳,在 King's B 平板上培养时发出荧光。FP830 基因组大小为 6.4 Mbp,GC 含量为 61.0 mol%。FP830 具有通过产生各种代谢物如丰原素、吡咯并菌素、吲哚-3-乙酸和挥发性物质 2,3-丁二醇来促进植物生长的潜力。系统发育分析表明,三个分离株形成一个独立的分支,与模式菌株 DSM 13194 和 SWRI12 最为密切相关。三个分离株与最接近的亲缘关系的平均核苷酸同一性和数字 DNA-DNA 杂交值均不高于 93.7%和 52.3%。主要的细胞脂肪酸为 C、总和特征 3(C7/Cω6)和总和特征 8(Cω7/Cω6)。主要的极性脂为磷脂酰乙醇胺、双磷脂酰甘油和氨基磷脂。主要的呼吸醌为泛醌(Q-9)。基于多相分类学分析,得出结论,菌株 FP830、FP2034 和 FP2262 代表了一个新种,属于 属,建议将新种命名为 sp. nov.。模式菌株为 FP830(=ACCC 62448=JCM 35689)。