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基于病理图像深度学习预测非肌层浸润性膀胱癌复发

Prediction of non-muscle invasive bladder cancer recurrence using deep learning of pathology image.

机构信息

Department of Urology, Xuzhou Cancer Hospital, Affiliated Hospital of Jiangsu University, Xuzhou, China.

Department of Urology, Xuzhou Central Hospital, Jiefang South Road, No. 199, Xuzhou, Jiangsu, China.

出版信息

Sci Rep. 2024 Aug 15;14(1):18931. doi: 10.1038/s41598-024-66870-9.

Abstract

We aimed to build a deep learning-based pathomics model to predict the early recurrence of non-muscle-infiltrating bladder cancer (NMIBC) in this work. A total of 147 patients from Xuzhou Central Hospital were enrolled as the training cohort, and 63 patients from Suqian Affiliated Hospital of Xuzhou Medical University were enrolled as the test cohort. Based on two consecutive phases of patch level prediction and WSI-level predictione, we built a pathomics model, with the initial model developed in the training cohort and subjected to transfer learning, and then the test cohort was validated for generalization. The features extracted from the visualization model were used for model interpretation. After migration learning, the area under the receiver operating characteristic curve for the deep learning-based pathomics model in the test cohort was 0.860 (95% CI 0.752-0.969), with good agreement between the migration training cohort and the test cohort in predicting recurrence, and the predicted values matched well with the observed values, with p values of 0.667766 and 0.140233 for the Hosmer-Lemeshow test, respectively. The good clinical application was observed using a decision curve analysis method. We developed a deep learning-based pathomics model showed promising performance in predicting recurrence within one year in NMIBC patients. Including 10 state prediction NMIBC recurrence group pathology features be visualized, which may be used to facilitate personalized management of NMIBC patients to avoid ineffective or unnecessary treatment for the benefit of patients.

摘要

本研究旨在建立一种基于深度学习的病理组学模型,以预测非浸润性膀胱癌(NMIBC)的早期复发。共有 147 例来自徐州中心医院的患者被纳入训练队列,63 例来自徐州医科大学附属宿迁医院的患者被纳入测试队列。基于两阶段的斑块级预测和 WSI 级预测,我们构建了一个病理组学模型,初始模型在训练队列中开发,并进行迁移学习,然后在测试队列中进行泛化验证。从可视化模型中提取的特征用于模型解释。迁移学习后,深度学习病理组学模型在测试队列中的受试者工作特征曲线下面积为 0.860(95%置信区间 0.752-0.969),在预测复发方面,迁移训练队列与测试队列具有良好的一致性,预测值与观察值吻合良好,Hosmer-Lemeshow 检验的 p 值分别为 0.667766 和 0.140233。决策曲线分析方法观察到了良好的临床应用效果。我们开发的基于深度学习的病理组学模型在预测 NMIBC 患者一年内复发方面表现出良好的性能。包括 10 个有状态预测 NMIBC 复发组病理学特征的可视化,这可能有助于对 NMIBC 患者进行个性化管理,避免对患者无益或不必要的治疗。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa3/11327297/61e78b10ce5d/41598_2024_66870_Fig1_HTML.jpg

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